RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 KAT5Q92993 513 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 TTC17Q96AE7 1141 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
MCF2L-223ENST00000473345 FCRL3Q96P31 734 aaPredicted RBP10□□□□□ -0.81
MCF2L-223ENST00000473345 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
MCF2L-223ENST00000473345 SGK2Q9HBY8 427 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 TMEM8AQ9HCN3 771 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 STIM2Q9P246 746 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 STRIP2Q9ULQ0 834 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 HPSEQ9Y251 543 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 HBS1LQ9Y450 684 aaKnown RBP10□□□□□ -0.81
MCF2L-223ENST00000473345 PCDHB1Q9Y5F3 818 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 CFAP46Q8IYW2 2715 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 KALRNO60229 2985 aa10□□□□□ -0.81
MCF2L-223ENST00000473345 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 O00370 1275 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 XPO1O14980 1071 aaKnown RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 BRINP1O60477 761 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 SDC3O75056 442 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 RFPL3O75679 317 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 F13A1P00488 732 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 GIMD1P0DJR0 217 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 LCP1P13796 627 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 JUPP14923 745 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 ME1P48163 572 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 ADPRHP54922 357 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 NXPH1P58417 271 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 PITX1P78337 314 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 INSM1Q01101 510 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 TLE3Q04726 772 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 ZBTB16Q05516 673 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 DPYDQ12882 1025 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 USP30Q70CQ3 517 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 HSCBQ8IWL3 235 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 SPACA3Q8IXA5 215 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 AHI1Q8N157 1196 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 STK40Q8N2I9 435 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 OR52K2Q8NGK3 314 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 SNIP1Q8TAD8 396 aaKnown RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 PTPRN2Q92932 1015 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 NXPE2Q96DL1 559 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 FCRL2Q96LA5 508 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 CDK5RAP1Q96SZ6 601 aaKnown RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 ACE2Q9BYF1 805 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-223ENST00000473345 ADAMTS1Q9UHI8 967 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 SARDHQ9UL12 918 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 PLA2G4CQ9UP65 541 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 PCDHGA1Q9Y5H4 931 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 MYLKQ15746 1914 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 SHROOM3Q8TF72 1996 aa9.99□□□□□ -0.81
MCF2L-223ENST00000473345 COL27A1Q8IZC6 1860 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PTPRQQ9UMZ3 2332 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 LY6G6EA0A0G2JKS1 128 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 A0A1W2PNU3 283 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PMS2P1A4D2B8 440 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ACSL4O60488 711 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 RNASEH2AO75792 299 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 RHOBTB3O94955 611 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ZSCAN22P10073 491 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 CD38P28907 300 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 SLC8A1P32418 973 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PSMD8P48556 350 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 HARS2P49590 506 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 IRAK1P51617 712 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PMS1P54277 932 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ARID5AQ03989 594 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 C19orf57Q0VDD7 668 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 PITRM1Q5JRX3 1037 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 INTS8Q75QN2 995 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ADAT2Q7Z6V5 191 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 CIR1Q86X95 450 aaPredicted RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ARHGAP18Q8N392 663 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 SLC25A45Q8N413 288 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 FIBINQ8TAL6 211 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 SLC35F5Q8WV83 523 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 FAM131CQ96AQ9 280 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 RPL10LQ96L21 214 aaKnown RBP9.98□□□□□ -0.81
MCF2L-223ENST00000473345 GOLPH3LQ9H4A5 285 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 UCKL1Q9NWZ5 548 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 RAB20Q9NX57 234 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 ERVW-1Q9UQF0 538 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 AK5Q9Y6K8 562 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 U3KQA8 63 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 MGAQ8IWI9 3026 aa9.98□□□□□ -0.81
MCF2L-223ENST00000473345 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 EIF4E1BA6NMX2 242 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 E9PAM4 449 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 TLR4O00206 839 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 LATO43561 262 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 CALUO43852 315 aaPredicted RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 RTN2O75298 545 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 LATS1O95835 1130 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 ITGAVP06756 1048 aa9.97□□□□□ -0.81
MCF2L-223ENST00000473345 POLR2EP19388 210 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 MAT2AP31153 395 aaKnown RBP9.97□□□□□ -0.81
MCF2L-223ENST00000473345 RXRGP48443 463 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms