RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 DMAC2Q9NW81 257 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FTSJ1Q9UET6 329 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 BTBD3Q9Y2F9 522 aa7.22□□□□□ -1.25
CKS1B-205ENST00000473344 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
CKS1B-205ENST00000473344 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SMTNL1A8MU46 457 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 E9PAM4 449 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 KIF2AO00139 706 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TERTO14746 1132 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 RRP8O43159 456 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 PCDHGA12O60330 932 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TSPAN3O60637 253 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 RNASEH1O60930 286 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 DKK1O94907 266 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ZBED1O96006 694 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SLFN14P0C7P3 912 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TRIM49P0CI25 452 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TRIM49CP0CI26 452 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 JUPP14923 745 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 POLR2EP19388 210 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ABCB4P21439 1286 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 NR2F2P24468 414 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 CD27P26842 260 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 CALRP27797 417 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 HLA-FP30511 346 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TKTL1P51854 596 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ST8SIA6P61647 398 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 C19orf57Q0VDD7 668 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 FOXD4L5Q5VV16 416 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TMEM215Q68D42 235 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 LAYNQ6UX15 382 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 LRRC69Q6ZNQ3 347 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 PIGZQ86VD9 579 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TMPRSS12Q86WS5 348 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 MARCH9Q86YJ5 346 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 FMNL3Q8IVF7 1028 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 FAM186BQ8IYM0 893 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 GRAMD1CQ8IYS0 662 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ZNF366Q8N895 744 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ZNF557Q8N988 423 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 KIAA0895Q8NCT3 520 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 C1orf216Q8TAB5 229 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 PIP4K2CQ8TBX8 421 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TAS1R2Q8TE23 839 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 WFIKKN2Q8TEU8 576 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 FOXD4L4Q8WXT5 416 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 NXPE2Q96DL1 559 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TMA16Q96EY4 203 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 P2RY11Q96G91 374 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TMEM176AQ96HP8 235 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 BBC3Q96PG8 261 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 UBL7Q96S82 380 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 UBXN6Q9BZV1 441 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 TMEM245Q9H330 911 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 KCTD10Q9H3F6 313 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 LRRC4Q9HBW1 653 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SGK2Q9HBY8 427 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 APOBEC3GQ9HC16 384 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ABCB8Q9NUT2 735 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SUN2Q9UH99 717 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SERTAD1Q9UHV2 236 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 GGA2Q9UJY4 613 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 CFAP45Q9UL16 551 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 CLEC4EQ9ULY5 219 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 SCML1Q9UN30 329 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 AK5Q9Y6K8 562 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 ASCC3Q8N3C0 2202 aaKnown RBP7.21□□□□□ -1.26
CKS1B-205ENST00000473344 KALRNO60229 2985 aa7.21□□□□□ -1.26
CKS1B-205ENST00000473344 IGSF10Q6WRI0 2623 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 TYW5A2RUC4 315 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 H0Y8X5 98 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 PLK4O00444 970 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 MAPK13O15264 365 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 LDOC1O95751 146 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 MYL1P05976 194 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 ITGAVP06756 1048 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 DLDP09622 509 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 CDK4P11802 303 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 RPL13P26373 211 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 HOXD9P28356 352 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 PSMC2P35998 433 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 SLC11A2P49281 568 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 RPS14P62263 151 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 SEMG2Q02383 582 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 TRIP4Q15650 581 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 PTPRNQ16849 979 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 RESP18Q5W5W9 173 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 ZNF776Q68DI1 518 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 KRT39Q6A163 491 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 CCDC117Q8IWD4 279 aaPredicted RBP7.2□□□□□ -1.26
CKS1B-205ENST00000473344 FAM217AQ8IXS0 508 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 SIX6OS1Q8N1H7 587 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 TXLNBQ8N3L3 684 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 ANKRD52Q8NB46 1076 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 BAP1Q92560 729 aa7.2□□□□□ -1.26
CKS1B-205ENST00000473344 PAGE5Q96GU1 130 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms