RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 APPL2Q8NEU8 664 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 MYRIPQ8NFW9 859 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 WHAMMQ8TF30 809 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 KBTBD7Q8WVZ9 684 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 RFFLQ8WZ73 363 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 TFAP2BQ92481 460 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF653Q96CK0 615 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 ALS2CR12Q96Q35 445 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 WDR24Q96S15 920 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 PCDHB18PQ96TA0 734 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 FAM83CQ9BQN1 747 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 MRPL45Q9BRJ2 306 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 IRX2Q9BZI1 471 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 SNX25Q9H3E2 840 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 FAM124BQ9H5Z6 455 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 GPAMQ9HCL2 828 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 NEUROD4Q9HD90 331 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 FAM49BQ9NUQ9 324 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 GDAP2Q9NXN4 497 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 DNAI1Q9UI46 699 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 INTUQ9ULD6 942 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 DYRK1BQ9Y463 629 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 CEP83Q9Y592 693 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 PAXBP1Q9Y5B6 917 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 CAPN6Q9Y6Q1 641 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 DUSP10Q9Y6W6 482 aa6.68□□□□□ -1.34
HDAC1-205ENST00000472928 NUP210Q8TEM1 1887 aaPredicted RBP6.68□□□□□ -1.34
HDAC1-205ENST00000472928 OBSL1O75147 1896 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 A0A0A6YYK5 440 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ANKRD62A6NC57 917 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 BTNL10A8MVZ5 291 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 A8MXQ7 604 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 CYB561D2O14569 222 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 EIF1AYO14602 144 aaKnown RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 KHNYNO15037 678 aaKnown RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 FANCGO15287 622 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 MED7O43513 233 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 HCRTO43612 131 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 BUB1O43683 1085 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 RTN2O75298 545 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TACC1O75410 805 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 MOCS3O95396 460 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 APBB3O95704 486 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 FTLP02792 175 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 OR4Q2P0C623 313 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ODC1P11926 461 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 CPB1P15086 417 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 WARSP23381 471 aaKnown RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 CASQ1P31415 396 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 RPL9P32969 192 aaKnown RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 NAP1L1P55209 391 aaKnown RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 LILRA4P59901 499 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 FAM193AP78312 1265 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 SIM1P81133 766 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 GRSF1Q12849 480 aaKnown RBP eCLIP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 DUSP4Q13115 394 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 GOLGA7BQ2TAP0 167 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 COL28A1Q2UY09 1125 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 PKDCCQ504Y2 493 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 SGO2Q562F6 1265 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 GPR158Q5T848 1215 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 WSCD1Q658N2 575 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TRIM68Q6AZZ1 485 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ACAD10Q6JQN1 1059 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 DENND1BQ6P3S1 775 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 DSTYKQ6XUX3 929 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 MON1BQ7L1V2 547 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ACOT1Q86TX2 421 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 OSTM1Q86WC4 334 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TTC9BQ8N6N2 239 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TTC16Q8NEE8 873 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 OR6B3Q8NGW1 331 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 KIF18AQ8NI77 898 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 BPIFB1Q8TDL5 484 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 FBF1Q8TES7 1133 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF606Q8WXB4 792 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 CPA5Q8WXQ8 436 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 PSMG2Q969U7 264 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ARHGEF26Q96DR7 871 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TRIM11Q96F44 468 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM176AQ96HP8 235 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 SENP8Q96LD8 212 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 NOX5Q96PH1 765 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 NAPGQ99747 312 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ZSWIM1Q9BR11 485 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 C11orf70Q9BRQ4 267 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 NT5C1AQ9BXI3 368 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 DNAI2Q9GZS0 605 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 THAP2Q9H0W7 228 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 ISCUQ9H1K1 167 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 DPEP3Q9H4B8 488 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 RUBCNLQ9H714 662 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 CACNA2D2Q9NY47 1150 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 EBF1Q9UH73 591 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms