RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CAPNS1P04632 268 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 CYBBP04839 570 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 HOXB3P14651 431 aaPredicted RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 TRIM21P19474 475 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 PON1P27169 355 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 USP8P40818 1118 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 CLDN6P56747 220 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 SLC8A3P57103 927 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 YWHAEP62258 255 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 KCNJ12Q14500 433 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 STARD3Q14849 445 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 KIF19Q2TAC6 998 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 HLA-BQ31612 363 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 MS4A13Q5J8X5 152 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 C9orf64Q5T6V5 341 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 OTUD1Q5VV17 481 aaPredicted RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 TMEM110Q86TL2 294 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 DHX40Q8IX18 779 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 LGI2Q8N0V4 545 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 DEFB106AQ8N104 65 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 PRCCQ92733 491 aaPredicted RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 IGSF8Q969P0 613 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 TTC17Q96AE7 1141 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 FAM149B1Q96BN6 582 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 PRMT1Q99873 361 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 SLC2A11Q9BYW1 496 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 OLA1Q9NTK5 396 aaKnown RBP8.38□□□□□ -1.07
USP48-207ENST00000471752 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 ZMIZ1Q9ULJ6 1067 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 SNX11Q9Y5W9 270 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 FAM208BQ5VWN6 2430 aa8.38□□□□□ -1.07
USP48-207ENST00000471752 KALRNO60229 2985 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 CFAP46Q8IYW2 2715 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 MEI4A8MW99 385 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 KCNU1A8MYU2 1149 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 P4HA2O15460 535 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 THAP12O43422 761 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 OPHN1O60890 802 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 CBFA2T3O75081 653 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 TRUB2O95900 331 aaKnown RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 IGLV3-19P01714 112 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 IGLV3-25P01717 112 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 ERBB2P04626 1255 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 WNT1P04628 370 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 PROS1P07225 676 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 DLDP09622 509 aaKnown RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 TACR2P21452 398 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 IL9RQ01113 521 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 CENPCQ03188 943 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 STIM1Q13586 685 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 PITRM1Q5JRX3 1037 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 TRIM65Q6PJ69 517 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 UNQ6494/PRO21346Q6UXR6 183 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 PHLDB2Q86SQ0 1253 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 MFN1Q8IWA4 741 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 PDCD7Q8N8D1 485 aaKnown RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 FIBINQ8TAL6 211 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 CEP76Q8TAP6 659 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 UCMAQ8WVF2 138 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 SNX19Q92543 992 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 BIRC7Q96CA5 298 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 NUP58Q9BVL2 599 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 NEUROG2Q9H2A3 272 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 LHX5Q9H2C1 402 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 FAM124BQ9H5Z6 455 aaPredicted RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 GAREM1Q9H706 876 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 RWDD2AQ9UIY3 292 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 SARDHQ9UL12 918 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 PLA2G4CQ9UP65 541 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 ERVW-1Q9UQF0 538 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
USP48-207ENST00000471752 PLXND1Q9Y4D7 1925 aa8.37□□□□□ -1.07
USP48-207ENST00000471752 ASXL3Q9C0F0 2248 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 A0A1B0GTW7 788 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 BICDL2A1A5D9 508 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 FAM47DPA6NHR8 397 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 C10orf142B7Z368 130 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 CBX4O00257 560 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 MID1O15344 667 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 BCAT2O15382 392 aaPredicted RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
USP48-207ENST00000471752 IRAK2O43187 625 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 TIMM44O43615 452 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 CNTN5O94779 1100 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 FBXO21O94952 628 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 FSBPO95073 299 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 ADCY5O95622 1261 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 MT-CO1P00395 513 aa8.36□□□□□ -1.07
USP48-207ENST00000471752 ATXN1LP0C7T5 689 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms