RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ZNF18P17022 549 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 DGKAP23743 735 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 LSSP48449 732 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 TKTL1P51854 596 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 KIF11P52732 1056 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 ADPRHP54922 357 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF211Q13398 564 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 CDKN3Q16667 212 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 BMT2Q1RMZ1 405 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 SGSM1Q2NKQ1 1148 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 C4orf17Q53FE4 359 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF542PQ5EBM4 170 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 SFMBT2Q5VUG0 894 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 NAPEPLDQ6IQ20 393 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 INO80CQ6PI98 192 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC186Q7Z3E2 898 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 STK40Q8N2I9 435 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 ARHGAP18Q8N392 663 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 CPXM2Q8N436 756 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 EXD3Q8N9H8 876 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 RBBP8NLQ8NC74 664 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 IFI44Q8TCB0 444 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 WFDC5Q8TCV5 224 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 PLD4Q96BZ4 506 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC97Q96F63 343 aaPredicted RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 KLHDC7BQ96G42 594 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 RPL10LQ96L21 214 aaKnown RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 HEXIM2Q96MH2 286 aaKnown RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 IPO9Q96P70 1041 aaKnown RBP7.15□□□□□ -1.26
HDAC1-204ENST00000471488 TWNKQ96RR1 684 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 NT5C1AQ9BXI3 368 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 IMPG2Q9BZV3 1241 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 DNAI2Q9GZS0 605 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 FZD3Q9NPG1 666 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 ANKMY1Q9P2S6 941 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 UBE4BO95155 1302 aa7.15□□□□□ -1.26
HDAC1-204ENST00000471488 PMS2P1A4D2B8 440 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 TGFB1I1O43294 461 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 NEBLO76041 1014 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 TNFSF15O95150 251 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 GJB6O95452 261 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 VNN1O95497 513 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 STAU1O95793 577 aaKnown RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 THEGLP0DJG4 465 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 PRLRP16471 622 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 GOT1P17174 413 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 HOXD13P35453 343 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CSKP41240 450 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CTSOP43234 321 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CCR5P51681 352 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 SLC8A3P57103 927 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 DLG4P78352 724 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 TLE1Q04724 770 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CDH18Q13634 790 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 HNRNPA1L2Q32P51 320 aaKnown RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 ACCSLQ4AC99 568 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 FAM26FQ5R3K3 315 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 PPP1R26Q5T8A7 1209 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CEP135Q66GS9 1140 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 MMS22LQ6ZRQ5 1243 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 UNC93AQ86WB7 457 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 PTRH1Q86Y79 214 aaKnown RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CRYBG2Q8N1P7 616 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 SLC25A45Q8N413 288 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 ARL14Q8N4G2 192 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 AADATQ8N5Z0 425 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 MFSD2AQ8NA29 543 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 RFFLQ8WZ73 363 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 DHX58Q96C10 678 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 APOLD1Q96LR9 279 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CCNL2Q96S94 520 aaPredicted RBP7.14□□□□□ -1.27
HDAC1-204ENST00000471488 ULBP1Q9BZM6 244 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 LRRC4Q9HBW1 653 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 SLC39A2Q9NP94 309 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 ASCL3Q9NQ33 180 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 EVA1BQ9NVM1 165 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 DNAJC28Q9NX36 388 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 CLIC5Q9NZA1 410 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 FZD4Q9ULV1 537 aa7.14□□□□□ -1.27
HDAC1-204ENST00000471488 COL6A6A6NMZ7 2263 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 A0A087X0B3 334 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 EDDM13A0A1B0GTR0 161 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 PIK3R2O00459 728 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 MUSKO15146 869 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SPTLC2O15270 562 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 EIF3DO15371 548 aaKnown RBP eCLIP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 MOCS3O95396 460 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ZBED1O96006 694 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 MOCS2O96007 188 aaPredicted RBP7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ADH1BP00325 375 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 HLA-DRAP01903 254 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 LCP1P13796 627 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 VAV1P15498 845 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 TGM2P21980 687 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 CASP1P29466 404 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 NNMTP40261 264 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 ASPAP45381 313 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 RXRGP48443 463 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 SLC11A2P49281 568 aa7.13□□□□□ -1.27
HDAC1-204ENST00000471488 STK19P49842 368 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms