RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 DQX1Q8TE96 717 aaKnown RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 RNF139Q8WU17 664 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 RIN2Q8WYP3 895 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 P3H4Q92791 437 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 ZNF707Q96C28 371 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 RMDN1Q96DB5 314 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 C1orf74Q96LT6 269 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 MYADMQ96S97 322 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 TMEM209Q96SK2 561 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 EPAS1Q99814 870 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 CALN1Q9BXU9 219 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 FRMD8Q9BZ67 464 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 FAM204AQ9H8W3 233 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 EPB41L5Q9HCM4 733 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 DDIT4Q9NX09 232 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 ARHGEF38Q9NXL2 777 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 DLL3Q9NYJ7 618 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 UXTQ9UBK9 157 aaPredicted RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 MTRF1LQ9UGC7 380 aaKnown RBP9.46□□□□□ -0.9
PTPRE-207ENST00000471218 PCSK1NQ9UHG2 260 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 TLR6Q9Y2C9 796 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 NEU2Q9Y3R4 380 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 NUMBLQ9Y6R0 609 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 PTPRDP23468 1912 aa9.46□□□□□ -0.9
PTPRE-207ENST00000471218 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 TCRBV7S2A1N4TA0A589 114 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 BCLAF3A2AJT9 711 aaKnown RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SOBPA7XYQ1 873 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 MAP2K7O14733 419 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 FGF10O15520 208 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 DCNP07585 359 aaKnown RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 MX2P20592 715 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 IL4RP24394 825 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 HOXC13P31276 330 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SERPINB6P35237 376 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 GJC1P36383 396 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SLMAPQ14BN4 828 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 PPP1R7Q15435 360 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 MLF2Q15773 248 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SMTNL2Q2TAL5 461 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SLC44A4Q53GD3 710 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ANKRD20A8PQ5CZ79 823 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 KCNT1Q5JUK3 1230 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ALS2CLQ60I27 953 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 AADACL2Q6P093 401 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SCYL2Q6P3W7 929 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 TTC27Q6P3X3 843 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 C1orf228Q6PIY5 440 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 TAS1R1Q7RTX1 841 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 CROCCP2Q86T23 111 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ITIH5Q86UX2 942 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 HOOK3Q86VS8 718 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 RFX6Q8HWS3 928 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 CDKL3Q8IVW4 592 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SCN4BQ8IWT1 228 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 PLD5Q8N7P1 536 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ATAD1Q8NBU5 361 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SLC7A14Q8TBB6 771 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 RSAD2Q8WXG1 361 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 HSPH1Q92598 858 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SNF8Q96H20 258 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 CSPG4P5Q96PW8 444 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 HEMGNQ9BXL5 484 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 WDCPQ9H6R7 721 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 PIGVQ9NUD9 493 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SPATA6Q9NWH7 488 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ZSCAN32Q9NX65 697 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 GDE1Q9NZC3 331 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 DLGAP2Q9P1A6 1054 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 NCDNQ9UBB6 729 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SLC12A6Q9UHW9 1150 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 ZMYM5Q9UJ78 669 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 SHOC2Q9UQ13 582 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 HBS1LQ9Y450 684 aaKnown RBP9.45□□□□□ -0.9
PTPRE-207ENST00000471218 CDY1Q9Y6F8 540 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 R4GN57 208 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 FRYLO94915 3013 aa9.45□□□□□ -0.9
PTPRE-207ENST00000471218 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PIK3R2O00459 728 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 MAN2B1O00754 1011 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 SEC31AO94979 1220 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 FGF19O95750 216 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 LATS1O95835 1130 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 OR1D2P34982 312 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 HSPA9P38646 679 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 RPS9P46781 194 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ALDH1A3P47895 512 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 DPYSQ14117 519 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 MORF4L2Q15014 288 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PAFAH1B3Q15102 231 aaKnown RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 PDK1Q15118 436 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 TRIP4Q15650 581 aaPredicted RBP9.44□□□□□ -0.9
PTPRE-207ENST00000471218 MGAT5BQ3V5L5 792 aa9.44□□□□□ -0.9
PTPRE-207ENST00000471218 ATP13A4Q4VNC1 1196 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms