RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 SUGP1Q8IWZ8 645 aaKnown RBP13.03□□□□□ -0.32
SND1-209ENST00000470723 PYROXD2Q8N2H3 581 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 PHTF2Q8N3S3 785 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■■■□ 24.1
SND1-209ENST00000470723 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 TSC1Q92574 1164 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 PRICKLE1Q96MT3 831 aaPredicted RBP13.03□□□□□ -0.32
SND1-209ENST00000470723 XPO6Q96QU8 1125 aaKnown RBP13.03□□□□□ -0.32
SND1-209ENST00000470723 SNRNP25Q9BV90 132 aaKnown RBP13.03□□□□□ -0.32
SND1-209ENST00000470723 HEBP1Q9NRV9 189 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 AP4E1Q9UPM8 1137 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 NEU3Q9UQ49 428 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 SNX10Q9Y5X0 201 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
SND1-209ENST00000470723 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.02□□□□□ -0.33
SND1-209ENST00000470723 TBL1XO60907 577 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 TULP3O75386 442 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 PEX5P50542 639 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 SGSHP51688 502 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 PLK1P53350 603 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 FZD5Q13467 585 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 PDK2Q15119 407 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 TAZQ16635 292 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 ANO4Q32M45 955 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 PREPLQ4J6C6 727 aaPredicted RBP13.02□□□□□ -0.33
SND1-209ENST00000470723 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 KCNT1Q5JUK3 1230 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 TRIM67Q6ZTA4 783 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 DAAM2Q86T65 1068 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 NLRP14Q86W24 1093 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 RHOT1Q8IXI2 618 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 SYCE1Q8N0S2 351 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 CFAP52Q8N1V2 620 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 EXOC4Q96A65 974 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
SND1-209ENST00000470723 OSBPL6Q9BZF3 934 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 EPHX3Q9H6B9 360 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
SND1-209ENST00000470723 ARHGEF3Q9NR81 526 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
SND1-209ENST00000470723 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 STARD13Q9Y3M8 1113 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 PCDHA3Q9Y5H8 950 aa13.02□□□□□ -0.33
SND1-209ENST00000470723 NUP205Q92621 2012 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 TMEM110-MUSTN1A8MSY1 372 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 NEDD8-MDP1E9PL57 170 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 PSTPIP1O43586 416 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 TIMM44O43615 452 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 PALMO75781 387 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 CNTN5O94779 1100 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 MOCS3O95396 460 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 RHOQP17081 205 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 DRD1P21728 446 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 KDELR1P24390 212 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 CTNNA2P26232 953 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 TNFRSF4P43489 277 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 SOX9P48436 509 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 NAP1L1P55209 391 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 OXCT1P55809 520 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 SLC12A1Q13621 1099 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 ALFQ53S48 1182 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 TXNDC11Q6PKC3 985 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 ZNF852Q6ZMS4 543 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 BMP8AQ7Z5Y6 402 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 TTC8Q8TAM2 541 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 FAM3CQ92520 227 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 KCTD15Q96SI1 283 aaPredicted RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 PNKPQ96T60 521 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 EPAS1Q99814 870 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 P2RY13Q9BPV8 354 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 ZWILCHQ9H900 591 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 PRDM16Q9HAZ2 1276 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 PCDH18Q9HCL0 1135 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 TMEM248Q9NWD8 314 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 DONSONQ9NYP3 566 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
SND1-209ENST00000470723 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms