RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 NR4A2P43354 598 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 FOXL2P58012 376 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 FAM3BP58499 235 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 AP2B1P63010 937 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 SHC2P98077 582 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 LAMB3Q13751 1172 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 TRIM14Q14142 442 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 PWP2Q15269 919 aaKnown RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 RPS6KA2Q15349 733 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 LRIG3Q6UXM1 1119 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 RINLQ6ZS11 566 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 SLC44A2Q8IWA5 706 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ADGRF3Q8IZF5 1079 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ARL14EPQ8N8R7 260 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ENAHQ8N8S7 591 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 NRACQ8N912 160 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 OR52N4Q8NGI2 321 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 MORC4Q8TE76 937 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 WIPF2Q8TF74 440 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 IGFBPL1Q8WX77 278 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ZFYVE19Q96K21 471 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ZNF48Q96MX3 618 aaPredicted RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 ELAC1Q9H777 363 aaKnown RBP4.43□□□□□ -1.7
BRCA2-202ENST00000470094 WDR26Q9H7D7 661 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 HEY2Q9UBP5 337 aa4.43□□□□□ -1.7
BRCA2-202ENST00000470094 DPPA5A6NC42 116 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 PRPF4O43172 522 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 IGKV2-30P06310 120 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 B4GALNT1Q00973 533 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 SRSF1Q07955 248 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 BIRC2Q13490 618 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 MTX1Q13505 466 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 TBRG1Q3YBR2 411 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 SULT6B1Q6IMI4 303 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 LIN54Q6MZP7 749 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 CACNA2D3Q8IZS8 1091 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 ARFGAP1Q8N6T3 406 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 CPT1BQ92523 772 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 C3orf49Q96BT1 292 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 RPS6KC1Q96S38 1066 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 ZNF347Q96SE7 839 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 SORBS1Q9BX66 1292 aaKnown RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 OSBPL5Q9H0X9 879 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 FOXP1Q9H334 677 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 PABPC3Q9H361 631 aaKnown RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 MLXIPQ9HAP2 919 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 DAPP1Q9UN19 280 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 HS3ST3B1Q9Y662 390 aa4.42□□□□□ -1.7
BRCA2-202ENST00000470094 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
BRCA2-202ENST00000470094 CYP3A7-CYP3A51PA0A087WV96 503 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
BRCA2-202ENST00000470094 CYP3A7P24462 503 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 CIITAP33076 1130 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 ME1P48163 572 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 CDK7P50613 346 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 PGM5Q15124 567 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 DLGAP5Q15398 846 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 MIDNQ504T8 468 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 PIP4P1Q86T03 277 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 PAQR4Q8N4S7 273 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-202ENST00000470094 SCAMP5Q8TAC9 235 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 PIMREGQ9BSJ6 248 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 MAGEH1Q9H213 219 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 POT1Q9NUX5 634 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
BRCA2-202ENST00000470094 COMMD10Q9Y6G5 202 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 LMTK3Q96Q04 1460 aa4.41□□□□□ -1.7
BRCA2-202ENST00000470094 TTBK1Q5TCY1 1321 aaPredicted RBP4.41□□□□□ -1.7
BRCA2-202ENST00000470094 TRBV5-3A0A0A0MS03 114 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 LY6G6EA0A0G2JKS1 128 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 KIR2DS5A0A0G2JLQ3 304 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 KIR2DS3K7RE56 304 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 NFATC1O95644 943 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 SERPINA4P29622 427 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 PCP4P48539 62 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 CCT4P50991 539 aaKnown RBP4.4□□□□□ -1.71
BRCA2-202ENST00000470094 RCAN1P53805 252 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 FOXO1Q12778 655 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 KRT72Q14CN4 511 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 PDCD2Q16342 344 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-202ENST00000470094 EPHA10Q5JZY3 1008 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 C10orf76Q5T2E6 689 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 C10orf62Q5T681 223 aaPredicted RBP4.4□□□□□ -1.71
BRCA2-202ENST00000470094 TTC22Q5TAA0 569 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 LRCH2Q5VUJ6 765 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 ISM2Q6H9L7 571 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 CCDC174Q6PII3 467 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 CYB5R4Q7L1T6 521 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 STT3BQ8TCJ2 826 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 CLEC4CQ8WTT0 213 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 TRAPPC9Q96Q05 1148 aa4.4□□□□□ -1.71
BRCA2-202ENST00000470094 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms