RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 MIF4GDA9UHW6 222 aaKnown RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 PGRMC1O00264 195 aaKnown RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 AXIN1O15169 862 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 GABBR2O75899 941 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 CYP1A2P05177 515 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 SETSIPP0DME0 302 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 KRT5P13647 590 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 TYRP14679 529 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 HNRNPLP14866 589 aaKnown RBP eCLIP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 ABCB4P21439 1286 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 ZNF132P52740 706 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 CASP8Q14790 479 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 ACAD10Q6JQN1 1059 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 DNAAF5Q86Y56 855 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 ZNF276Q8N554 614 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 CAMKK1Q8N5S9 505 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 EIF1ADQ8N9N8 165 aaKnown RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 IL17RCQ8NAC3 791 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 TXNDC5Q8NBS9 432 aaKnown RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 TSTD1Q8NFU3 115 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 CDK5RAP1Q96SZ6 601 aaKnown RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 UVRAGQ9P2Y5 699 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 PACSIN2Q9UNF0 486 aaPredicted RBP18.28■□□□□ 0.52
MRPL28-208ENST00000469744 CNTN6Q9UQ52 1028 aa18.28■□□□□ 0.52
MRPL28-208ENST00000469744 SLC12A8A0AV02 714 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 YJEFN3A6XGL0 299 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 E7ENQ6 273 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 SGK1O00141 431 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 DCLK1O15075 740 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 TGM1P22735 817 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 CORO1AP31146 461 aaKnown RBP18.27■□□□□ 0.52
MRPL28-208ENST00000469744 KIR2DL1P43626 348 aaPredicted RBP18.27■□□□□ 0.52
MRPL28-208ENST00000469744 MRPS21P82921 87 aaKnown RBP18.27■□□□□ 0.52
MRPL28-208ENST00000469744 CNGA2Q16280 664 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 PPP2R5EQ16537 467 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 ANO7Q6IWH7 933 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 PMF1Q6P1K2 205 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 TMEM92Q6UXU6 159 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 TRIM72Q6ZMU5 477 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 KBTBD6Q86V97 674 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 CCDC26Q8TAB7 109 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 RMDN1Q96DB5 314 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 TPSD1Q9BZJ3 242 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 CARD9Q9H257 536 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 OSGEPQ9NPF4 335 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 STRIP2Q9ULQ0 834 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 INVSQ9Y283 1065 aa18.27■□□□□ 0.52
MRPL28-208ENST00000469744 CCDC163A0A0D9SF12 145 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DDX3YO15523 660 aaKnown RBP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CEP104O60308 925 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 MMEP08473 750 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 ID4P47928 161 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DGKEP52429 567 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 COG7P83436 770 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CRY1Q16526 586 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CLEC16AQ2KHT3 1053 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 GRAMD4Q6IC98 578 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 IFT20Q8IY31 132 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 TERB1Q8NA31 727 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 AENQ8WTP8 325 aaKnown RBP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CLEC4CQ8WTT0 213 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 SLC35F5Q8WV83 523 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 KCTD13Q8WZ19 329 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 TRIM11Q96F44 468 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 NAP1L3Q99457 506 aaPredicted RBP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 ACP6Q9NPH0 428 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 GDF3Q9NR23 364 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 SFMBT1Q9UHJ3 866 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 A0A0A0MRY4 1105 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CACNG3O60359 315 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 ADAM23O75077 832 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 RETP07949 1114 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 MYBL1P10243 752 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 TNFRSF4P43489 277 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DAOAP59103 153 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 NNTQ13423 1086 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CCDC6Q16204 474 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 ERLEC1Q96DZ1 483 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CNGB3Q9NQW8 809 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 SMARCAL1Q9NZC9 954 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 MARK1Q9P0L2 795 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 CTTNBP2NLQ9P2B4 639 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 WDR35Q9P2L0 1181 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 AGO1Q9UL18 857 aaKnown RBP18.26■□□□□ 0.51
MRPL28-208ENST00000469744 HCN2Q9UL51 889 aa18.26■□□□□ 0.51
MRPL28-208ENST00000469744 ABCA7Q8IZY2 2146 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 MSI1O43347 362 aaKnown RBP18.25■□□□□ 0.51
MRPL28-208ENST00000469744 WASP42768 502 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 TAF3Q5VWG9 929 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 EMBQ6PCB8 327 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 ZNF513Q8N8E2 541 aaPredicted RBP18.25■□□□□ 0.51
MRPL28-208ENST00000469744 MDGA1Q8NFP4 955 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 RNF139Q8WU17 664 aa18.25■□□□□ 0.51
MRPL28-208ENST00000469744 XPO6Q96QU8 1125 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms