RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TMLHEQ9NVH6 421 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 SH3BP4Q9P0V3 963 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 PI4KBQ9UBF8 816 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 FZD4Q9ULV1 537 aa5.7□□□□□ -1.5
LSM5-209ENST00000468872 EPB41L2O43491 1005 aaKnown RBP5.69□□□□□ -1.5
LSM5-209ENST00000468872 LATS1O95835 1130 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 CSF1P09603 554 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 MATN1P21941 496 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 LIFRP42702 1097 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 COPB1P53618 953 aaKnown RBP5.69□□□□□ -1.5
LSM5-209ENST00000468872 RCAN1P53805 252 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 CFHR3Q02985 330 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 GAB1Q13480 694 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 TRPC3Q13507 836 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 ANKRD1Q15327 319 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 PROSER3Q2NL68 480 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 CTXN3Q4LDR2 81 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 RETSATQ6NUM9 610 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 WDR93Q6P2C0 686 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 KIAA1324Q6UXG2 1013 aaKnown RBP5.69□□□□□ -1.5
LSM5-209ENST00000468872 BCDIN3DQ7Z5W3 292 aaKnown RBP5.69□□□□□ -1.5
LSM5-209ENST00000468872 LINS1Q8NG48 757 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 PIGSQ96S52 555 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 SEC62Q99442 399 aaKnown RBP5.69□□□□□ -1.5
LSM5-209ENST00000468872 CIPCQ9C0C6 399 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 UBN1Q9NPG3 1134 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 ASIC5Q9NY37 505 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 SLC13A4Q9UKG4 626 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 BAG5Q9UL15 447 aa5.69□□□□□ -1.5
LSM5-209ENST00000468872 CC2D2AQ9P2K1 1620 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 VWA3AA6NCI4 1184 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 A6NLC8 198 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 KAT7O95251 611 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
LSM5-209ENST00000468872 CHN1P15882 459 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 DUSP1P28562 367 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 SSBP2P81877 361 aaPredicted RBP5.68□□□□□ -1.5
LSM5-209ENST00000468872 MTX3Q5HYI7 312 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 ZNF425Q6IV72 752 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 KYAT3Q6YP21 454 aaKnown RBP5.68□□□□□ -1.5
LSM5-209ENST00000468872 ZNF66Q6ZN08 573 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 ZNF804AQ7Z570 1209 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 PTGR2Q8N8N7 351 aaPredicted RBP5.68□□□□□ -1.5
LSM5-209ENST00000468872 FSIP1Q8NA03 581 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 TERB1Q8NA31 727 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 MAFAQ8NHW3 353 aaPredicted RBP5.68□□□□□ -1.5
LSM5-209ENST00000468872 SEMA4CQ9C0C4 833 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 SEMA5BQ9P283 1151 aa5.68□□□□□ -1.5
LSM5-209ENST00000468872 CYP3A7-CYP3A51PA0A087WV96 503 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 FYB1O15117 783 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 SEPT4O43236 478 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 EXOC3O60645 756 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 PRR35P0CG20 571 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 ACP5P13686 325 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 ATF7P17544 494 aaPredicted RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 XBP1P17861 261 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 TNFAIP3P21580 790 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 CYP3A7P24462 503 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 DDIT3P35638 169 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 AGTR2P50052 363 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 VAMP2P63027 116 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 MPP1Q00013 466 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 DDX10Q13206 875 aaKnown RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 SIM2Q14190 667 aaPredicted RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 ATG16L1Q676U5 607 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 AKAP1Q92667 903 aaKnown RBP eCLIP5.67□□□□□ -1.5
LSM5-209ENST00000468872 ARRDC3Q96B67 414 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 HVCN1Q96D96 273 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 RBM17Q96I25 401 aaKnown RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 NPAS1Q99742 590 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 GPR63Q9BZJ6 419 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 GAR1Q9NY12 217 aaKnown RBP5.67□□□□□ -1.5
LSM5-209ENST00000468872 TMEM98Q9Y2Y6 226 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 ZNF804BA4D1E1 1349 aa5.67□□□□□ -1.5
LSM5-209ENST00000468872 SAC3D1A6NKF1 404 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 SMIM22K7EJ46 135 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 KLK10O43240 276 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 MT-CO3P00414 261 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 ALDOAP04075 364 aaKnown RBP5.66□□□□□ -1.5
LSM5-209ENST00000468872 ATP1A3P13637 1013 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 CPA1P15085 419 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 IGFBP2P18065 325 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 KELP23276 732 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 WDR5P61964 334 aaKnown RBP5.66□□□□□ -1.5
LSM5-209ENST00000468872 MAPK7Q13164 816 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 MFSD13AQ14CX5 517 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 ZNF626Q68DY1 528 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 LAS2Q8IYD9 372 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 USP38Q8NB14 1042 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 ADGRE3Q9BY15 652 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 RNF26Q9BY78 433 aaPredicted RBP5.66□□□□□ -1.5
LSM5-209ENST00000468872 PDE11AQ9HCR9 933 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 B3GNT3Q9Y2A9 372 aa5.66□□□□□ -1.5
LSM5-209ENST00000468872 COPG1Q9Y678 874 aaKnown RBP5.66□□□□□ -1.5
LSM5-209ENST00000468872 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 C3orf70A6NLC5 250 aaPredicted RBP5.65□□□□□ -1.5
LSM5-209ENST00000468872 H3BNC9 293 aa5.65□□□□□ -1.5
LSM5-209ENST00000468872 GRM8O00222 908 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms