RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TUBGCP4Q9UGJ1 667 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 A0A088AWK7 358 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 MAGEA13PA6NCF6 341 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 ARHGAP42A6NI28 874 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 HACD1B0YJ81 288 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 KLHL2O95198 593 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 RANBP1P43487 201 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 TMEM62Q0P6H9 643 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 HIC1Q14526 733 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PCLAFQ15004 111 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 GRIK4Q16099 956 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 RNF220Q5VTB9 566 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 POU5F2Q8N7G0 328 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 ARNTL2Q8WYA1 636 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 EZH1Q92800 747 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 GATA6Q92908 595 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 OLFM3Q96PB7 478 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 SERPINE1P05121 402 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 ITGA2BP08514 1039 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PGAM1P18669 254 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 BST2Q10589 180 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 RABGAP1LQ5R372 815 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 IZUMO2Q6UXV1 221 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PLEKHH3Q7Z736 793 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 FAM131BQ86XD5 332 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 C10orf107Q8IVU9 208 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 GSTCDQ8NEC7 633 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 SHKBP1Q8TBC3 707 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PPP4R1Q8TF05 950 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 C18orf25Q96B23 403 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 EPAS1Q99814 870 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 GPAMQ9HCL2 828 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PNPOQ9NVS9 261 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 PPM1HQ9ULR3 514 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 USP3Q9Y6I4 520 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 SCN1AP35498 2009 aa16.21■□□□□ 0.19
TSPAN4-211ENST00000468468 CITO14578 2027 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 UNCXA6NJT0 531 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 RNF103O00237 685 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 MFSD11O43934 449 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 USP1O94782 785 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 PPM1JQ5JR12 505 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 RSPH3Q86UC2 560 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 UNC93AQ86WB7 457 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 HACE1Q8IYU2 909 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 ANKRD52Q8NB46 1076 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 B4GALNT2Q8NHY0 566 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 STN1Q9H668 368 aaKnown RBP16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 SETD4Q9NVD3 440 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 SEPT10Q9P0V9 454 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 CPA4Q9UI42 421 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 ASB3Q9Y575 518 aa16.21■□□□□ 0.18
TSPAN4-211ENST00000468468 STK10O94804 968 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 BCAT1P54687 386 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 TMCO4Q5TGY1 634 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 CES3Q6UWW8 571 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 ATG14Q6ZNE5 492 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 C2orf69Q8N8R5 385 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 SYBUQ9NX95 663 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 TMEM216Q9P0N5 145 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 DNAJB4Q9UDY4 337 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 SIN3BO75182 1162 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 FKBP6O75344 327 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 PROCP04070 461 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 TYK2P29597 1187 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 IDH3AP50213 366 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 DSG1Q02413 1049 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 KIZQ2M2Z5 673 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 MAVSQ7Z434 540 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 RASSF3Q86WH2 238 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 CCNJLQ8IV13 435 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 P2RY11Q96G91 374 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 SORT1Q99523 831 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 ECSITQ9BQ95 431 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 TXNDC16Q9P2K2 825 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 FZD10Q9ULW2 581 aa16.2■□□□□ 0.18
TSPAN4-211ENST00000468468 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 PRKCGP05129 697 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 UBTFL6P0CB48 400 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 ERVK-10P10266 1014 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 PSMB4P28070 264 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 GMPRP36959 345 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 NAB1Q13506 487 aa16.19■□□□□ 0.18
TSPAN4-211ENST00000468468 RALGPS1Q5JS13 557 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms