RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
CDHR3-205ENST00000468143 MKRN2Q9H000 416 aaKnown RBP11.94□□□□□ -0.5
CDHR3-205ENST00000468143 WDCPQ9H6R7 721 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 PRDM16Q9HAZ2 1276 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 RTN4Q9NQC3 1192 aaKnown RBP11.94□□□□□ -0.5
CDHR3-205ENST00000468143 ANLNQ9NQW6 1124 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 SEPT11Q9NVA2 429 aaKnown RBP11.94□□□□□ -0.5
CDHR3-205ENST00000468143 PCDHGA5Q9Y5G8 931 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 SNX10Q9Y5X0 201 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 HS3ST4Q9Y661 456 aa11.94□□□□□ -0.5
CDHR3-205ENST00000468143 ATXN2Q99700 1313 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PRR5-ARHGAP8B1AHC4 643 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PATE3B3GLJ2 98 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 ZNF217O75362 1048 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PAGE1O75459 146 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 ATP5BP06576 529 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 DLDP09622 509 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 CSKP41240 450 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 IRAK1P51617 712 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 COPAP53621 1224 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 ARHGAP8P85298 464 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 CENPCQ03188 943 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 AUHQ13825 339 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 IQCB1Q15051 598 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PITRM1Q5JRX3 1037 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 CYP2U1Q7Z449 544 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 MSANTD4Q8NCY6 345 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PRCCQ92733 491 aaPredicted RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 TTC17Q96AE7 1141 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 SIPA1Q96FS4 1042 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 RPRD1AQ96P16 312 aaPredicted RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 AGPAT1Q99943 283 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 TMEM245Q9H330 911 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 TMEM74BQ9NUR3 256 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 KIAA1522Q9P206 1035 aaPredicted RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 TMEM59LQ9UK28 342 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
CDHR3-205ENST00000468143 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
CDHR3-205ENST00000468143 PTPRZ1P23471 2315 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 DCDC2BA2VCK2 349 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 SERPINC1P01008 464 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 UNGP13051 313 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 MMP8P22894 467 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ITPKAP23677 461 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 MZF1P28698 734 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 CXCR3P49682 368 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ATP11AP98196 1134 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 E2F5Q15329 346 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 SLC25A52Q3SY17 297 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 FILIP1LQ4L180 1135 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 RAB6CQ53S08 254 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 SLC36A4Q6YBV0 504 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 SND1Q7KZF4 910 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 DGLUCYQ7Z3D6 616 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 FAM124AQ86V42 546 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 LUZP1Q86V48 1076 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ZNF557Q8N988 423 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 JOSD2Q8TAC2 188 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 NT5C3BQ969T7 300 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 RPL10LQ96L21 214 aaKnown RBP11.92□□□□□ -0.5
CDHR3-205ENST00000468143 MRGPRX3Q96LB0 322 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 RAB6CQ9H0N0 254 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 PRSS16Q9NQE7 514 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ITM2CQ9NQX7 267 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ARHGEF38Q9NXL2 777 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 DLL3Q9NYJ7 618 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 RRN3Q9NYV6 651 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 ERVW-1Q9UQF0 538 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 EML5Q05BV3 1969 aa11.92□□□□□ -0.5
CDHR3-205ENST00000468143 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 TTC34A8MYJ7 566 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 AP5Z1O43299 807 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 NDUFS2O75306 463 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 CNTN5O94779 1100 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 MOCS3O95396 460 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 F9P00740 461 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 ACADMP11310 421 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 SCNN1AP37088 669 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 ST8SIA6P61647 398 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 IRX4P78413 519 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 ZNF33AQ06730 810 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 CAMK2GQ13555 558 aaPredicted RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 CDO1Q16878 200 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 CLEC16AQ2KHT3 1053 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 C15orf59Q2T9L4 293 aaPredicted RBP11.91□□□□□ -0.5
CDHR3-205ENST00000468143 PLEKHG6Q3KR16 790 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
CDHR3-205ENST00000468143 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms