RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 PRR19A6NJB7 356 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 C10orf142B7Z368 130 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 MID1O15344 667 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
VPS26A-204ENST00000467852 LATO43561 262 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 RARGP13631 454 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 SCP2P22307 547 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 NCKAP1LP55160 1127 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 RBP5P82980 135 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 PDE4CQ08493 712 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
VPS26A-204ENST00000467852 C1orf127Q8N9H9 656 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 WFIKKN2Q8TEU8 576 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 DDI1Q8WTU0 396 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 SYNDIG1Q9H7V2 258 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 PISDQ9UG56 409 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
VPS26A-204ENST00000467852 CLEC4EQ9ULY5 219 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 PHTF1Q9UMS5 762 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 A0A1W2PQC6 194 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 CDKL5O76039 1030 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 CD82P27701 267 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 PDX1P52945 283 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 SLC5A3P53794 718 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 ADPRHP54922 357 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 DHX8Q14562 1220 aaKnown RBP12.19□□□□□ -0.46
VPS26A-204ENST00000467852 CST6Q15828 149 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 CHST9Q7L1S5 443 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 DTX1Q86Y01 620 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 ZNF518BQ9C0D4 1074 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 IL37Q9NZH6 218 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
VPS26A-204ENST00000467852 UBE4BO95155 1302 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PRAMEF33A0A0G2JMD5 474 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 TTLL8A6PVC2 850 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PRAMEF26H0Y7S4 382 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PRAMEF10O60809 474 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 NEBLO76041 1014 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 ATP5BP06576 529 aaKnown RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 HGFP14210 728 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 GOT1P17174 413 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 WARSP23381 471 aaKnown RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 MAT2AP31153 395 aaKnown RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 SLC8A1P32418 973 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 GNL1P36915 607 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PPP2CBP62714 309 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PPP2CAP67775 309 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 EHHADHQ08426 723 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 NR0B2Q15466 257 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 MMAAQ8IVH4 418 aaKnown RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 KCNN1Q92952 543 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 PREBQ9HCU5 417 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
VPS26A-204ENST00000467852 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
VPS26A-204ENST00000467852 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 ATP8B3O60423 1300 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 FAM92AA1XBS5 289 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 EFCAB7A8K855 629 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 CLDN5O00501 218 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 STC2O76061 302 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 PRF1P14222 555 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 PTPN1P18031 435 aaKnown RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 ATP1A2P50993 1020 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 HNRNPKP61978 463 aaKnown RBP eCLIP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 STK3Q13188 491 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 GNL2Q13823 731 aaKnown RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 SEPT6Q14141 434 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 ZXDCQ2QGD7 858 aaPredicted RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 PERM1Q5SV97 790 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 CPT1CQ8TCG5 803 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 GLMNQ92990 594 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 NAT6Q93015 286 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
VPS26A-204ENST00000467852 IFT43Q96FT9 208 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 SALL4Q9UJQ4 1053 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 UNC13CQ8NB66 2214 aa12.17□□□□□ -0.46
VPS26A-204ENST00000467852 K7ENM7 598 aa12.16□□□□□ -0.46
VPS26A-204ENST00000467852 MUSKO15146 869 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms