RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 SMAD1Q15797 465 aaKnown RBP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 PTPRNQ16849 979 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 MPPE1Q53F39 396 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 TTC39CQ8N584 583 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 CCDC150Q8NCX0 1101 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 WFIKKN2Q8TEU8 576 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 ANKRD6Q9Y2G4 727 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 SNX11Q9Y5W9 270 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 SLCO1B1Q9Y6L6 691 aa16.38■□□□□ 0.21
TSSC4-208ENST00000467308 MUC22E2RYF6 1773 aaPredicted RBP16.38■□□□□ 0.21
TSSC4-208ENST00000467308 A0A087WV48 116 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 TRABD2BA6NFA1 517 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 SEMA4FO95754 770 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 HLA-EP13747 358 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 HLA-FP30511 346 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 CCT8P50990 548 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 PPP3CAQ08209 521 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 FIGNQ5HY92 759 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 PM20D1Q6GTS8 502 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 SCUBE3Q8IX30 993 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 PDCD7Q8N8D1 485 aaKnown RBP16.37■□□□□ 0.21
TSSC4-208ENST00000467308 BIRC7Q96CA5 298 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 LRIG1Q96JA1 1093 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 BTBD1Q9H0C5 482 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 TMEM8AQ9HCN3 771 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 TM9SF3Q9HD45 589 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 OLA1Q9NTK5 396 aaKnown RBP16.37■□□□□ 0.21
TSSC4-208ENST00000467308 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
TSSC4-208ENST00000467308 SIK3Q9Y2K2 1263 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 DAAM1Q9Y4D1 1078 aa16.37■□□□□ 0.21
TSSC4-208ENST00000467308 E9PAM4 449 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 PES1O00541 588 aaKnown RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 PAPSS1O43252 624 aaPredicted RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 DFNA5O60443 496 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TSPAN3O60637 253 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 CD27P26842 260 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 HARS2P49590 506 aaKnown RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 SLC8A3P57103 927 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 CETN1Q12798 172 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TBX2Q13207 712 aaPredicted RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TRIM14Q14142 442 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 FNDC3BQ53EP0 1204 aaKnown RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 ZNF394Q53GI3 561 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 KIAA0907Q7Z7F0 614 aaPredicted RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 ANKRD52Q8NB46 1076 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 ARID3AQ99856 593 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 PLCB1Q9NQ66 1216 aa16.36■□□□□ 0.21
TSSC4-208ENST00000467308 HBS1LQ9Y450 684 aaKnown RBP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.36■□□□□ 0.21
TSSC4-208ENST00000467308 TP53BP1Q12888 1972 aaPredicted RBP16.35■□□□□ 0.21
TSSC4-208ENST00000467308 GOLGA8CPA6NN73 597 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 LATS1O95835 1130 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 ZBED1O96006 694 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 MXI1P50539 228 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 TKTL1P51854 596 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 BCAT1P54687 386 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 RPS14P62263 151 aaKnown RBP16.35■□□□□ 0.21
TSSC4-208ENST00000467308 KCNMA1Q12791 1236 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 SYCP1Q15431 976 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 INAVAQ3KP66 663 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 CBWD6Q4V339 395 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 CBWD3Q5JTY5 395 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 CBWD5Q5RIA9 395 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 KRT39Q6A163 491 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 SMYD5Q6GMV2 418 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 ADIPOR2Q86V24 386 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 AHI1Q8N157 1196 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 CYB5D2Q8WUJ1 264 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 BBC3Q96PG8 261 aaPredicted RBP16.35■□□□□ 0.21
TSSC4-208ENST00000467308 EDEM3Q9BZQ6 932 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 SGK2Q9HBY8 427 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 CISHQ9NSE2 258 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 BPTFQ12830 3046 aa16.35■□□□□ 0.21
TSSC4-208ENST00000467308 HELZ2Q9BYK8 2649 aaKnown RBP16.35■□□□□ 0.21
TSSC4-208ENST00000467308 COL5A1P20908 1838 aaPredicted RBP16.35■□□□□ 0.21
TSSC4-208ENST00000467308 EIF4E1BA6NMX2 242 aaKnown RBP16.34■□□□□ 0.21
TSSC4-208ENST00000467308 DNTTP04053 509 aa16.34■□□□□ 0.21
TSSC4-208ENST00000467308 ATP5BP06576 529 aaKnown RBP16.34■□□□□ 0.21
TSSC4-208ENST00000467308 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
TSSC4-208ENST00000467308 CTSKP43235 329 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms