RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF474Q6S9Z5 364 aaPredicted RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 SLC39A5Q6ZMH5 540 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 FAM57BQ71RH2 274 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 UBE2Q1Q7Z7E8 422 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 ADGRF3Q8IZF5 1079 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 ARL14EPQ8N8R7 260 aaPredicted RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 SCAMP5Q8TAC9 235 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 CLEC4CQ8WTT0 213 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 NSMCE1Q8WV22 266 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 RMDN3Q96TC7 470 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 RTKNQ9BST9 563 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 BRD8Q9H0E9 1235 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 OSBPL5Q9H0X9 879 aaPredicted RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 FOXP1Q9H334 677 aaPredicted RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 SEPSECSQ9HD40 501 aaKnown RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 TMEM45AQ9NWC5 275 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 DACT1Q9NYF0 836 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 HEY2Q9UBP5 337 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
SMC4-207ENST00000467263 NFU1Q9UMS0 254 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 DAPP1Q9UN19 280 aa4.73□□□□□ -1.65
SMC4-207ENST00000467263 TTC3P53804 2025 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3DA0A087WVF3 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3IA0A087WXS9 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3BA6NDS4 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 ACTL6BO94805 426 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 CSTBP04080 98 aaKnown RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 ALPLP05186 524 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TLE3Q04726 772 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 OS9Q13438 667 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 BLMHQ13867 455 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TRIM60Q495X7 471 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 CCDC38Q502W7 563 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 C10orf62Q5T681 223 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 ATPAF1Q5TC12 328 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 SULT6B1Q6IMI4 303 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 CCDC174Q6PII3 467 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 DEF8Q6ZN54 512 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 EID2BQ96D98 161 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 CAMK1GQ96NX5 476 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 ZNF347Q96SE7 839 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 SORBS1Q9BX66 1292 aaKnown RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 MLXIPQ9HAP2 919 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 HERC5Q9UII4 1024 aaKnown RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.72□□□□□ -1.65
SMC4-207ENST00000467263 ZMYM2Q9UBW7 1377 aa4.72□□□□□ -1.65
SMC4-207ENST00000467263 AGAP5A6NIR3 686 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 C3orf70A6NLC5 250 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 PRR23D1E9PI22 279 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 LARGE1O95461 756 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 ALDOCP09972 364 aaKnown RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 PRR23D2P0DMB1 279 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 TFEBP19484 476 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 PNLIPRP1P54315 467 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 AP2B1P63010 937 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 RBM6P78332 1123 aaKnown RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 MTX1Q13505 466 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 PGM5Q15124 567 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 RPS6KA2Q15349 733 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 TUBB8Q3ZCM7 444 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 KIAA1161Q6NSJ0 714 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 SLC44A2Q8IWA5 706 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 CCDC117Q8IWD4 279 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 BCAS4Q8TDM0 211 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 ZFPM2Q8WW38 1151 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 MARK4Q96L34 752 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 RPS6KC1Q96S38 1066 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 ELAC1Q9H777 363 aaKnown RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 SFXN1Q9H9B4 322 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 LIN7CQ9NUP9 197 aaKnown RBP4.71□□□□□ -1.66
SMC4-207ENST00000467263 NOTCH4Q99466 2003 aa4.71□□□□□ -1.66
SMC4-207ENST00000467263 A0A1W2PPC1 479 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 F8W810 466 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 CNOT3O75175 753 aaKnown RBP4.7□□□□□ -1.66
SMC4-207ENST00000467263 PEX14O75381 377 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 CYP3A4P08684 503 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 TMEM191BP0C7N4 346 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 IGFBP2P18065 325 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 TGM2P21980 687 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 THBS3P49746 956 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 BIRC2Q13490 618 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 RRAGAQ7L523 313 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 CACNA2D3Q8IZS8 1091 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 ADPRHL1Q8NDY3 354 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 SPATA3Q8NHX4 192 aa4.7□□□□□ -1.66
SMC4-207ENST00000467263 STT3BQ8TCJ2 826 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms