RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LDLRP01130 860 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 ENO1P06733 434 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 SNRNP70P08621 437 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 U2AF1L5P0DN76 240 aaPredicted RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 TPH1P17752 444 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 EN2P19622 333 aaPredicted RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 MATN1P21941 496 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 ACVR2AP27037 513 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 CPT1AP50416 773 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 COPAP53621 1224 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 U2AF1Q01081 240 aaKnown RBP eCLIP4.28□□□□□ -1.72
XRN1-206ENST00000467077 ACSM2AQ08AH3 577 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 NFE2Q16621 373 aaPredicted RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 DNTTIP2Q5QJE6 756 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 FAM102BQ5T8I3 360 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 SWSAP1Q6NVH7 229 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 RFLNBQ8N5W9 214 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 GJA10Q969M2 543 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 EPYCQ99645 322 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 STK31Q9BXU1 1019 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 B3GNT5Q9BYG0 378 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 MAP6D1Q9H9H5 199 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 ZMAT3Q9HA38 289 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 TBC1D14Q9P2M4 693 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 PCDHB2Q9Y5E7 798 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 EID1Q9Y6B2 187 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 PPRC1Q5VV67 1664 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 FHAD1B1AJZ9 1412 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 CUL7Q14999 1698 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 RAB27BO00194 218 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 MAP4K4O95819 1239 aaPredicted RBP4.27□□□□□ -1.73
XRN1-206ENST00000467077 RASSF2P50749 326 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 SLC39A14Q15043 492 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 PPP2R5AQ15172 486 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 HLFQ16534 295 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 TTC39AQ5SRH9 613 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 FNBP1LQ5T0N5 605 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
XRN1-206ENST00000467077 JDP2Q8WYK2 163 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 MAML1Q92585 1016 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 IGSF21Q96ID5 467 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 ZNF845Q96IR2 970 aaPredicted RBP4.27□□□□□ -1.73
XRN1-206ENST00000467077 C1QTNF5Q9BXJ0 243 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 IGSF9Q9P2J2 1179 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 DTX4Q9Y2E6 619 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 BIVM-ERCC5R4GMW8 1640 aa4.27□□□□□ -1.73
XRN1-206ENST00000467077 TP53BP1Q12888 1972 aaPredicted RBP4.27□□□□□ -1.73
XRN1-206ENST00000467077 ERICH3Q5RHP9 1530 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 F7P08709 466 aaPredicted RBP4.26□□□□□ -1.73
XRN1-206ENST00000467077 ARSBP15848 533 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 CCDC6Q16204 474 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 MINDY4Q4G0A6 757 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 NXNQ6DKJ4 435 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 TCEAL8Q8IYN2 117 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 SUCLG2Q96I99 432 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 TMEM60Q9H2L4 133 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 ATP6V0A4Q9HBG4 840 aa4.26□□□□□ -1.73
XRN1-206ENST00000467077 CAPN8A6NHC0 703 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 INMTO95050 263 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 TBX6O95947 436 aaPredicted RBP4.25□□□□□ -1.73
XRN1-206ENST00000467077 SLC7A1P30825 629 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 ABATP80404 500 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 GAB1Q13480 694 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 WRNQ14191 1432 aaPredicted RBP eCLIP4.25□□□□□ -1.73
XRN1-206ENST00000467077 KIF19Q2TAC6 998 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 AASDHQ4L235 1098 aaPredicted RBP4.25□□□□□ -1.73
XRN1-206ENST00000467077 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.25□□□□□ -1.73
XRN1-206ENST00000467077 MAEAQ7L5Y9 396 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 ANKRD13AQ8IZ07 590 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 KIAA0319LQ8IZA0 1049 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 MAGEB6Q8N7X4 407 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 IL31RAQ8NI17 732 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 ADAMTS14Q8WXS8 1223 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 ZDHHC12Q96GR4 267 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 DDX31Q9H8H2 851 aaKnown RBP4.25□□□□□ -1.73
XRN1-206ENST00000467077 SDF2L1Q9HCN8 221 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 C1orf112Q9NSG2 853 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 VPS51Q9UID3 782 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 PCDHAC2Q9Y5I4 1007 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 COL15A1P39059 1388 aa4.25□□□□□ -1.73
XRN1-206ENST00000467077 TOP2BQ02880 1626 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 IGKV3D-20A0A0C4DH25 116 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 BMPR1BO00238 502 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 TSPAN6O43657 245 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 SGPL1O95470 568 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 LCATP04180 440 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 WNT1P04628 370 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 ZNF84P51523 738 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 DMWDQ09019 674 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 CYB5R4Q7L1T6 521 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 MICU3Q86XE3 530 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 YAF2Q8IY57 180 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 GABPB2Q8TAK5 448 aaPredicted RBP4.24□□□□□ -1.73
XRN1-206ENST00000467077 C22orf23Q9BZE7 217 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 EGLN1Q9GZT9 426 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 CATSPERBQ9H7T0 1116 aa4.24□□□□□ -1.73
XRN1-206ENST00000467077 TCEAL9Q9UHQ7 104 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms