RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 CEP83Q9Y592 693 aa12.41□□□□□ -0.42
GTF3A-205ENST00000466776 SNX11Q9Y5W9 270 aa12.41□□□□□ -0.42
GTF3A-205ENST00000466776 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
GTF3A-205ENST00000466776 KNTC1P50748 2209 aa12.41□□□□□ -0.42
GTF3A-205ENST00000466776 ATRXP46100 2492 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 SPEGQ15772 3267 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 ZFYVE26Q68DK2 2539 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 LRRC72A6NJI9 287 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 PIK3R2O00459 728 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 CAPN9O14815 690 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 TNFSF14O43557 240 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 PCDHGA12O60330 932 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 APOEP02649 317 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 SRPRAP08240 638 aaKnown RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 NNMTP40261 264 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 ACADSBP45954 432 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 SGSHP51688 502 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 RACK1P63244 317 aaKnown RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 NUCB2P80303 420 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 BNC1Q01954 994 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 HNRNPA1L2Q32P51 320 aaKnown RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 KIAA0895LQ68EN5 471 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 PMF1Q6P1K2 205 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 TMPRSS7Q7RTY8 843 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 SLCO6A1Q86UG4 719 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 FMR1NBQ8N0W7 255 aaPredicted RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 CARNMT1Q8N4J0 409 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 FAM149B1Q96BN6 582 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 RSPH9Q9H1X1 276 aaPredicted RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.42
GTF3A-205ENST00000466776 FBXL12Q9NXK8 326 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 TLR6Q9Y2C9 796 aa12.4□□□□□ -0.42
GTF3A-205ENST00000466776 BICDL2A1A5D9 508 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 TARSL2A2RTX5 802 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 YKT6O15498 198 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 BRD2P25440 801 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 SLC6A4P31645 630 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 CSKP41240 450 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 GCNT1Q02742 428 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 ACAP1Q15027 740 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 DQX1Q8TE96 717 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 TFAP2BQ92481 460 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 TIGD1Q96MW7 591 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 OMDQ99983 421 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 MIS12Q9H081 205 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 ST7Q9NRC1 585 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 TJP2Q9UDY2 1190 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 FTSJ1Q9UET6 329 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 FZD4Q9ULV1 537 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 DSPP15924 2871 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
GTF3A-205ENST00000466776 BAHCC1Q9P281 2608 aa12.39□□□□□ -0.43
GTF3A-205ENST00000466776 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 A0A1W2PPC4 97 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 TAF4O00268 1085 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 VILLO15195 856 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 PAPSS1O43252 624 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 MED7O43513 233 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 SIN3BO75182 1162 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 LUC7L3O95232 432 aaKnown RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 GNA14O95837 355 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 MOCS2O96007 188 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 CAPNS1P04632 268 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 ATXN1LP0C7T5 689 aaKnown RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 CDK4P11802 303 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 COL9A2Q14055 689 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 CST6Q15828 149 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 MS4A13Q5J8X5 152 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 BEND5Q7L4P6 421 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 DHX40Q8IX18 779 aaKnown RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 SPATA20Q8TB22 786 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 WFDC5Q8TCV5 224 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
GTF3A-205ENST00000466776 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 TOR4AQ9NXH8 423 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 ERVW-1Q9UQF0 538 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 GPSM3Q9Y4H4 160 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 MYLKQ15746 1914 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 APC2O95996 2303 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
GTF3A-205ENST00000466776 A0A1W2PP55 124 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 E9PAM4 449 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 H0Y8X5 98 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 MID1O15344 667 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 RNASEH2AO75792 299 aaKnown RBP12.37□□□□□ -0.43
GTF3A-205ENST00000466776 DKK1O94907 266 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 ADH1BP00325 375 aa12.37□□□□□ -0.43
GTF3A-205ENST00000466776 KRT5P13647 590 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms