RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ZNF276Q8N554 614 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ARL14EPQ8N8R7 260 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 TTC16Q8NEE8 873 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 FEZF2Q8TBJ5 459 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 FAM149B1Q96BN6 582 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 C18orf8Q96DM3 657 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 SNF8Q96H20 258 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 CFAP57Q96MR6 1250 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 RAB3IPQ96QF0 476 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 MYCBPQ99417 103 aaPredicted RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 NCAPGQ9BPX3 1015 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 KXD1Q9BQD3 176 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 TRMT61BQ9BVS5 477 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 SLC46A2Q9BY10 475 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 ZDHHC18Q9NUE0 388 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 HAUS2Q9NVX0 235 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 NOCTQ9UK39 431 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 LSM7Q9UK45 103 aaKnown RBP10.36□□□□□ -0.75
PMF1-204ENST00000466489 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 EFR3BQ9Y2G0 817 aa10.36□□□□□ -0.75
PMF1-204ENST00000466489 C2orf78A6NCI8 922 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 HEPACAM2A8MVW5 462 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 PIK3R2O00459 728 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SLC9A3R1O14745 358 aaPredicted RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 TJP3O95049 919 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 LTFP02788 710 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 CALB1P05937 261 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 ABHD2P08910 425 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 RPL34P49207 117 aaKnown RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 PEX5P50542 639 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 DNA2P51530 1060 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 NOMO3P69849 1222 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SLC7A9P82251 487 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 COG7P83436 770 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 IL9RQ01113 521 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 CCDC15Q0P6D6 951 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 BSPRYQ5W0U4 402 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 OR6B2Q6IFH4 312 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 PARM1Q6UWI2 310 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 PIGWQ7Z7B1 504 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 APLFQ8IW19 511 aaPredicted RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 MFSD6LQ8IWD5 586 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SCUBE3Q8IX30 993 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 RHOT1Q8IXI2 618 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 CCDC13Q8IYE1 715 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 KIAA1958Q8N8K9 716 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 GIMAP7Q8NHV1 300 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 BPIFB1Q8TDL5 484 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 DDX1Q92499 740 aaKnown RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 RAPGEF5Q92565 580 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 FGF14Q92915 247 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 IRF7Q92985 503 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 RBM41Q96IZ5 413 aaKnown RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 ZSWIM3Q96MP5 696 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 NECAB3Q96P71 396 aaPredicted RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 FRMD8Q9BZ67 464 aaPredicted RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 THAP2Q9H0W7 228 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.35□□□□□ -0.75
PMF1-204ENST00000466489 WDR35Q9P2L0 1181 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SMG5Q9UPR3 1016 aaKnown RBP10.35□□□□□ -0.75
PMF1-204ENST00000466489 SH3BP1Q9Y3L3 701 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 C5orf42Q9H799 3197 aa10.35□□□□□ -0.75
PMF1-204ENST00000466489 SPTBN5Q9NRC6 3674 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 E7ENQ6 273 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 COCHO43405 550 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 DCXO43602 365 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 KIF1CO43896 1103 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 OLFM2O95897 454 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 ASGR2P07307 311 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 SRFP11831 508 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 NCAM1P13591 858 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 TCF3P15923 654 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 ABCB4P21439 1286 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 COMTP21964 271 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 SCNN1AP37088 669 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 IFNAR2P48551 515 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 YWHAZP63104 245 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 FMO1Q01740 532 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 BEND5Q7L4P6 421 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 ZNF564Q8TBZ8 553 aaPredicted RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 CSGALNACT1Q8TDX6 532 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 CPA5Q8WXQ8 436 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 USP13Q92995 863 aaPredicted RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 ALKBH8Q96BT7 664 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 CPXM1Q96SM3 734 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 CCSER2Q9H7U1 834 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 POPDC2Q9HBU9 364 aa10.34□□□□□ -0.75
PMF1-204ENST00000466489 SSU72Q9NP77 194 aaKnown RBP10.34□□□□□ -0.75
PMF1-204ENST00000466489 PARVAQ9NVD7 372 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms