RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 FAM92AA1XBS5 289 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 FOXN3O00409 490 aaPredicted RBP8.97□□□□□ -0.97
DDR1-242ENST00000465966 CCP110O43303 1012 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 ZSCAN12O43309 604 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 AP1G2O75843 785 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 DKK1O94907 266 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 STAU1O95793 577 aaKnown RBP8.97□□□□□ -0.97
DDR1-242ENST00000465966 CISD3P0C7P0 127 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 HLA-EP13747 358 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 ARHGAP25P42331 645 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 GRK6P43250 576 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 MFAP3P55082 362 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 CDH8P55286 799 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 PTK2Q05397 1052 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 CUL2Q13617 745 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 ZNF699Q32M78 642 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 INAVAQ3KP66 663 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 CCDC157Q569K6 752 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 TADA2BQ86TJ2 420 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 FAM35AQ86V20 835 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 FAM71AQ8IYT1 594 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 SLC20A1Q8WUM9 679 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 SLC39A7Q92504 469 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 SNX19Q92543 992 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 KLF16Q9BXK1 252 aaPredicted RBP8.97□□□□□ -0.97
DDR1-242ENST00000465966 NIF3L1Q9GZT8 377 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 XYLT2Q9H1B5 865 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 PCED1AQ9H1Q7 454 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 DEF6Q9H4E7 631 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 TOR4AQ9NXH8 423 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 TRIM10Q9UDY6 481 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 EIF2B4Q9UI10 523 aaKnown RBP8.97□□□□□ -0.97
DDR1-242ENST00000465966 NOCTQ9UK39 431 aaKnown RBP8.97□□□□□ -0.97
DDR1-242ENST00000465966 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
DDR1-242ENST00000465966 TFR2Q9UP52 801 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 ZNF510Q9Y2H8 683 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 DMXL2Q8TDJ6 3036 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 CACNA1EQ15878 2313 aa8.97□□□□□ -0.97
DDR1-242ENST00000465966 DSPP15924 2871 aaKnown RBP8.96□□□□□ -0.97
DDR1-242ENST00000465966 ADAMTS20P59510 1910 aa8.96□□□□□ -0.97
DDR1-242ENST00000465966 A0A087X0T9 212 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 FAM149AA5PLN7 773 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CAPN9O14815 690 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 RRP8O43159 456 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 AKR1B10O60218 316 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 GREM1O60565 184 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 TBX18O95935 607 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 IGLV3-19P01714 112 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 FAM228BP0C875 321 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CDK4P11802 303 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 P4HA1P13674 534 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 ACO1P21399 889 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 HNF1BP35680 557 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CHKAP35790 457 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 ASPAP45381 313 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 PLA2G4AP47712 749 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CSNK1EP49674 416 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 CCT8P50990 548 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 VAV2P52735 878 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 SCARA5Q6ZMJ2 495 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 ENOSF1Q7L5Y1 443 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 ZNF605Q86T29 641 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 TMPRSS12Q86WS5 348 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 LSM14AQ8ND56 463 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 PIP4K2CQ8TBX8 421 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 EPS8L1Q8TE68 723 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 BHMTQ93088 406 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 WBP2Q969T9 261 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 NXPE2Q96DL1 559 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 IMPG2Q9BZV3 1241 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 MKRN2Q9H000 416 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 ACP6Q9NPH0 428 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 CYLDQ9NQC7 956 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 KRT82Q9NSB4 513 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 PLK2Q9NYY3 685 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 THAP10Q9P2Z0 257 aaPredicted RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 DNMT3LQ9UJW3 386 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 SLC27A6Q9Y2P4 619 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 NME7Q9Y5B8 376 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 BZW2Q9Y6E2 419 aaKnown RBP8.96□□□□□ -0.98
DDR1-242ENST00000465966 PCNX2A6NKB5 2137 aa8.96□□□□□ -0.98
DDR1-242ENST00000465966 ZNF638Q14966 1978 aaKnown RBP8.95□□□□□ -0.98
DDR1-242ENST00000465966 GOLGA6L9A6NEM1 432 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 CAPN8A6NHC0 703 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 DDX3XO00571 662 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■■■■■ 42.7
DDR1-242ENST00000465966 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
DDR1-242ENST00000465966 FANCGO15287 622 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 CYP26A1O43174 497 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 TIMM44O43615 452 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 PCDHGA12O60330 932 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 DFNA5O60443 496 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 IPO7O95373 1038 aaKnown RBP8.95□□□□□ -0.98
DDR1-242ENST00000465966 CALCAP01258 141 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 PRB1P04280 392 aa8.95□□□□□ -0.98
DDR1-242ENST00000465966 CYBBP04839 570 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms