RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	DOCK6	Q96HP0	2047 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	IGF2R	P11717	2491 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	APOC4-APOC2	K7ER74	178 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	DYNC1I1	O14576	645 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	DCLK1	O15075	740 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	TP73	O15350	636 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	MSI1	O43347	362 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	CST8	O60676	142 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	TJP3	O95049	919 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	APOC2	P02655	101 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	POU2F2	P09086	479 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	SPATA31D3	P0C874	917 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	PECAM1	P16284	738 aa	Predicted RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	DES	P17661	470 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	IVD	P26440	423 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	TNFRSF8	P28908	595 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	ALDH1A3	P47895	512 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	MRPS25	P82663	173 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	RING1	Q06587	406 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	IFRD2	Q12894	506 aa	Predicted RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	NME3	Q13232	169 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	TRIP4	Q15650	581 aa	Predicted RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	PLPP4	Q5VZY2	271 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	PDE12	Q6L8Q7	609 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	EP400NL	Q6ZTU2	488 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	SPATA31D4	Q6ZUB0	917 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	CCDC50	Q8IVM0	306 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	KLHL7	Q8IXQ5	586 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	DCLK2	Q8N568	766 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	KREMEN2	Q8NCW0	462 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	RNF139	Q8WU17	664 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	MAGOHB	Q96A72	148 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	SERPINB11	Q96P15	392 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	OLFM3	Q96PB7	478 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	HAPLN3	Q96S86	360 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	EMILIN2	Q9BXX0	1053 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	PARD6B	Q9BYG5	372 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	TKTL2	Q9H0I9	626 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	DHX35	Q9H5Z1	703 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	CCSER2	Q9H7U1	834 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	FAM204A	Q9H8W3	233 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	PRDM16	Q9HAZ2	1276 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	ARHGEF4	Q9NR80	690 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	OLA1	Q9NTK5	396 aa	Known RBP	9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	ETNK2	Q9NVF9	386 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	LMCD1	Q9NZU5	365 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	AMACR	Q9UHK6	382 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	NUDT5	Q9UKK9	219 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	MTUS1	Q9ULD2	1270 aa		9.12	□□□□□ -0.95
UBA3-208	ENST00000465627	CHD5	Q8TDI0	1954 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	SMG1	Q96Q15	3661 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	HELZ	P42694	1942 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GOLGA6L10	A0A0M3HER8	536 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRRG1	O14668	218 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	TTI1	O43156	1089 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	COCH	O43405	550 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GREM1	O60565	184 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	TLR5	O60602	858 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	CLASP2	O75122	1294 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	S1PR4	O95977	384 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	C8A	P07357	584 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	RHOXF2B	P0C7M4	288 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	MYBL2	P10244	700 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GOT1	P17174	413 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	ECHS1	P30084	290 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	HOXA9	P31269	272 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GBP1	P32455	592 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	CETN2	P41208	172 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	KCNJ1	P48048	391 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PPP3CC	P48454	512 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	ZNF135	P52742	658 aa	Predicted RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	VSNL1	P62760	191 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRR20E	P86478	221 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRR20C	P86479	221 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRR20D	P86480	221 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRR20B	P86481	221 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRR20A	P86496	221 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	SLC10A2	Q12908	348 aa	Predicted RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PLD1	Q13393	1074 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GPM6B	Q13491	265 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	DHX34	Q14147	1143 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	TFDP2	Q14188	446 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PAFAH1B3	Q15102	231 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	NOMO1	Q15155	1222 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	TRADD	Q15628	312 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	DUPD1	Q68J44	220 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	NCBP2-AS2	Q69YL0	99 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	C8orf74	Q6P047	294 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	CCDC137	Q6PK04	289 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	GAREM2	Q75VX8	874 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	MAP7D3	Q8IWC1	876 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	TMEM105	Q8N8V8	129 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	ACTL9	Q8TC94	416 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	C1orf54	Q8WWF1	131 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	C1orf74	Q96LT6	269 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	PRMT1	Q99873	361 aa	Known RBP	9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	RHOXF2	Q9BQY4	288 aa		9.11	□□□□□ -0.95
UBA3-208	ENST00000465627	CALN1	Q9BXU9	219 aa		9.11	□□□□□ -0.95

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