RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 DRGXA6NNA5 263 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 LAMTOR5O43504 91 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 PSMA2P25787 234 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 CXCL12P48061 93 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 EIF4HQ15056 248 aaKnown RBP20.98■□□□□ 0.95
SKA3-205ENST00000465471 ARL13BQ3SXY8 428 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 C2orf27AQ580R0 203 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 MANEALQ5VSG8 457 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 SYT13Q7L8C5 426 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.98■□□□□ 0.95
SKA3-205ENST00000465471 IL17RCQ8NAC3 791 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 WFIKKN2Q8TEU8 576 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 RPRD1AQ96P16 312 aaPredicted RBP20.98■□□□□ 0.95
SKA3-205ENST00000465471 PACSIN1Q9BY11 444 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 SIK2Q9H0K1 926 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 OSBPL2Q9H1P3 480 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 ABCB8Q9NUT2 735 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 SPTLC3Q9NUV7 552 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 STIM2Q9P246 746 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 IMPACTQ9P2X3 320 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 GGA2Q9UJY4 613 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 MMP17Q9ULZ9 603 aa20.98■□□□□ 0.95
SKA3-205ENST00000465471 K7ESF4 209 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 TMEM253P0C7T8 217 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 PABPC1P11940 636 aaKnown RBP20.97■□□□□ 0.95
SKA3-205ENST00000465471 HNRNPLP14866 589 aaKnown RBP eCLIP20.97■□□□□ 0.95
SKA3-205ENST00000465471 CD70P32970 193 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 AIF1P55008 147 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 ZNF528Q3MIS6 628 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 EGFLAMQ63HQ2 1017 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 CHST9Q7L1S5 443 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 ADIPOR2Q86V24 386 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 CIR1Q86X95 450 aaPredicted RBP20.97■□□□□ 0.95
SKA3-205ENST00000465471 CCAR2Q8N163 923 aaKnown RBP20.97■□□□□ 0.95
SKA3-205ENST00000465471 ZNF513Q8N8E2 541 aaPredicted RBP20.97■□□□□ 0.95
SKA3-205ENST00000465471 NELL1Q92832 810 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 NUP85Q9BW27 656 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 RAPGEFL1Q9UHV5 662 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 NEU3Q9UQ49 428 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 FANCMQ8IYD8 2048 aa20.97■□□□□ 0.95
SKA3-205ENST00000465471 E9PAM4 449 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 ADAM23O75077 832 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 LCA5LO95447 670 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 H2AFZP0C0S5 128 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 DESP17661 470 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 HOXA6P31267 233 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 TIE1P35590 1138 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 PTPN5P54829 565 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 LMAN2Q12907 356 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 CDH18Q13634 790 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 FSCBQ5H9T9 825 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 CXorf57Q6NSI4 855 aaKnown RBP20.96■□□□□ 0.95
SKA3-205ENST00000465471 H2AFVQ71UI9 128 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 AHI1Q8N157 1196 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 CARNMT1Q8N4J0 409 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 ALLCQ8N6M5 410 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 NIPA2Q8N8Q9 360 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 ZNF212Q9UDV6 495 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 INTS6Q9UL03 887 aaKnown RBP20.96■□□□□ 0.95
SKA3-205ENST00000465471 FZD10Q9ULW2 581 aa20.96■□□□□ 0.95
SKA3-205ENST00000465471 LRCH4O75427 683 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CLDN11O75508 207 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CNTN5O94779 1100 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 KLF8O95600 359 aaPredicted RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 SP9P0CG40 484 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CDH4P55283 916 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 ENPP2Q13822 863 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 ACAP1Q15027 740 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 FUT11Q495W5 492 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 ALFQ53S48 1182 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CYP4V2Q6ZWL3 525 aaPredicted RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 TRMT11Q7Z4G4 463 aaKnown RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 SLFN11Q7Z7L1 901 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CCDC170Q8IYT3 715 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 CTNNBL1Q8WYA6 563 aaPredicted RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 ZDHHC4Q9NPG8 344 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 POLR3BQ9NW08 1133 aaPredicted RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 ELOVL2Q9NXB9 296 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 UVRAGQ9P2Y5 699 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 THAP10Q9P2Z0 257 aaPredicted RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 PPARGC1AQ9UBK2 798 aaKnown RBP20.95■□□□□ 0.94
SKA3-205ENST00000465471 OR12D3Q9UGF7 316 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 TBC1D30Q9Y2I9 924 aa20.95■□□□□ 0.94
SKA3-205ENST00000465471 FAM72CH0Y354 149 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 H0Y626 953 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 SGK1O00141 431 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 TIMM44O43615 452 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 PCK1P35558 622 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 SEMA3BQ13214 749 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 DMC1Q14565 340 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 FAM72AQ5TYM5 149 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 FAM72DQ6L9T8 149 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 LRRC31Q6UY01 552 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 FAM72BQ86X60 149 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 TXNDC5Q8NBS9 432 aaKnown RBP20.94■□□□□ 0.94
SKA3-205ENST00000465471 ZNF564Q8TBZ8 553 aaPredicted RBP20.94■□□□□ 0.94
SKA3-205ENST00000465471 TTC17Q96AE7 1141 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 PEBP4Q96S96 227 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 ACOX2Q99424 681 aa20.94■□□□□ 0.94
SKA3-205ENST00000465471 GABRG3Q99928 467 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms