RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ALFQ53S48 1182 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 FAM72AQ5TYM5 149 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 FAM72DQ6L9T8 149 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 TMEM92Q6UXU6 159 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ANKS1BQ7Z6G8 1248 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ADIPOR2Q86V24 386 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 FAM72BQ86X60 149 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ZNF683Q8IZ20 524 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 APCDD1Q8J025 514 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
CUX1-207ENST00000465461 PYROXD2Q8N2H3 581 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 OR52K2Q8NGK3 314 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 FIBINQ8TAL6 211 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
CUX1-207ENST00000465461 LMLNQ96KR4 655 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CCDC42Q96M95 316 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CNPY3Q9BT09 278 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 NUP85Q9BW27 656 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 SLC2A11Q9BYW1 496 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CIPCQ9C0C6 399 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 GPATCH2LQ9NWQ4 482 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 CACNA2D2Q9NY47 1150 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 GGA2Q9UJY4 613 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 INTS6Q9UL03 887 aaKnown RBP12.04□□□□□ -0.48
CUX1-207ENST00000465461 SLC8A2Q9UPR5 921 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 RAD54BQ9Y620 910 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 R4GN57 208 aa12.04□□□□□ -0.48
CUX1-207ENST00000465461 SSU72P8A0A1W2PR75 194 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
CUX1-207ENST00000465461 E9PAM4 449 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 ATG13O75143 517 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 MYBL1P10243 752 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 TDGF1P13385 188 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
CUX1-207ENST00000465461 CSKP41240 450 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 FNTBP49356 437 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 PTPN5P54829 565 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 MRPS21P82921 87 aaKnown RBP12.03□□□□□ -0.48
CUX1-207ENST00000465461 SRSF5Q13243 272 aaKnown RBP12.03□□□□□ -0.48
CUX1-207ENST00000465461 CDH18Q13634 790 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 FUT11Q495W5 492 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 PREPLQ4J6C6 727 aaPredicted RBP12.03□□□□□ -0.48
CUX1-207ENST00000465461 RABGAP1LQ5R372 815 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 MBLAC2Q68D91 279 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 RNF43Q68DV7 783 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 SYT13Q7L8C5 426 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 TFAP2DQ7Z6R9 452 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 SLFN11Q7Z7L1 901 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 CPNE8Q86YQ8 564 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 TRIM11Q96F44 468 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 C1orf74Q96LT6 269 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 HAPLN3Q96S86 360 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 ELOVL2Q9NXB9 296 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 SCINQ9Y6U3 715 aa12.03□□□□□ -0.48
CUX1-207ENST00000465461 DRGXA6NNA5 263 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 ABCB7O75027 752 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 CYP1A2P05177 515 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 HLA-EP13747 358 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 TCF4P15884 667 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 IL12RB1P42701 662 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 CTSOP43234 321 aaPredicted RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 NHLH1Q02575 133 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 ZNF234Q14588 700 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 CRY1Q16526 586 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 CA9Q16790 459 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 CXorf57Q6NSI4 855 aaKnown RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 KIAA1211LQ6NV74 962 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 KIAA0907Q7Z7F0 614 aaPredicted RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 AHI1Q8N157 1196 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 ZNF366Q8N895 744 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
CUX1-207ENST00000465461 PRRX2Q99811 253 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 IER2Q9BTL4 223 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 SLC6A17Q9H1V8 727 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 MTG2Q9H4K7 406 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 MRPL47Q9HD33 250 aaKnown RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 THAP10Q9P2Z0 257 aaPredicted RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 FBXO4Q9UKT5 387 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 FZD10Q9ULW2 581 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 MMP17Q9ULZ9 603 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 TFR2Q9UP52 801 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 PAXBP1Q9Y5B6 917 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 STON1Q9Y6Q2 735 aa12.02□□□□□ -0.49
CUX1-207ENST00000465461 MYO18AQ92614 2054 aaKnown RBP12.02□□□□□ -0.49
CUX1-207ENST00000465461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.01□□□□□ -0.49
CUX1-207ENST00000465461 A0A1B0GVM2 712 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 TCAF2A6NFQ2 919 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 SOWAHDA6NJG2 315 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 H2AFZP0C0S5 128 aa12.01□□□□□ -0.49
CUX1-207ENST00000465461 HOXB2P14652 356 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms