RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 MLH1P40692 756 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 NSUN2Q08J23 767 aaKnown RBP eCLIP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 HDAC1Q13547 482 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 ARHGAP15Q53QZ3 475 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 DLK2Q6UY11 383 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 SAMD3Q8N6K7 520 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 RBMXL3Q8N7X1 1067 aaKnown RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 MYLK2Q9H1R3 596 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 FBXO9Q9UK97 447 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 PCDHA7Q9UN72 937 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 UBE2J1Q9Y385 318 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-208ENST00000464001 PCDHB7Q9Y5E2 793 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
ITGB1-208ENST00000464001 RPS10-NUDT3A0A1W2PQS6 291 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 A6NNC1 897 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 M0QZQ0 153 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 RHODO00212 210 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 NPC1O15118 1278 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 NDST3O95803 873 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 IFNA2P01563 188 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 MYL1P05976 194 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 IFIT5Q13325 482 aaKnown RBP4.69□□□□□ -1.66
ITGB1-208ENST00000464001 CSHL1Q14406 222 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 BRD3Q15059 726 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 ASIC2Q16515 512 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 MAPKAPK3Q16644 382 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 ARL13BQ3SXY8 428 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 TTC39AQ5SRH9 613 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 C10orf62Q5T681 223 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-208ENST00000464001 C16orf89Q6UX73 402 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 RASGRP3Q8IV61 690 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 TXLNBQ8N3L3 684 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 OR52N4Q8NGI2 321 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 ATP2A3Q93084 1043 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 FAR2Q96K12 515 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.69□□□□□ -1.66
ITGB1-208ENST00000464001 STARD7Q9NQZ5 370 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 RGL1Q9NZL6 768 aa4.69□□□□□ -1.66
ITGB1-208ENST00000464001 CKAP5Q14008 2032 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 TNFRSF13BO14836 293 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-208ENST00000464001 PPP6R2O75170 966 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 NFATC1O95644 943 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 WNT1P04628 370 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 TGM2P21980 687 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 PRIM2P49643 509 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 LMOD3Q0VAK6 560 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 ZRSR2Q15696 482 aaKnown RBP4.68□□□□□ -1.66
ITGB1-208ENST00000464001 ODF3L2Q3SX64 289 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 WDR78Q5VTH9 848 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 WDR93Q6P2C0 686 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 KSR2Q6VAB6 950 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 CYB5R4Q7L1T6 521 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 DCP1BQ8IZD4 617 aaKnown RBP4.68□□□□□ -1.66
ITGB1-208ENST00000464001 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 OIT3Q8WWZ8 545 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 MIB2Q96AX9 1013 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 ZNF347Q96SE7 839 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 PAAF1Q9BRP4 392 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 TMX4Q9H1E5 349 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-208ENST00000464001 HIF1ANQ9NWT6 349 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 CA14Q9ULX7 337 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 ICKQ9UPZ9 632 aa4.68□□□□□ -1.66
ITGB1-208ENST00000464001 PNMA6EA0A0J9YXQ4 647 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 CNTN5O94779 1100 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 TNFRSF8P28908 595 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 SLC37A1P57057 533 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 KIAA1755Q5JYT7 1200 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 MSANTD2Q6P1R3 559 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 SLC39A5Q6ZMH5 540 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 PAQR4Q8N4S7 273 aaPredicted RBP4.67□□□□□ -1.66
ITGB1-208ENST00000464001 GLIS1Q8NBF1 620 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 TBCBQ99426 244 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 GDF15Q99988 308 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 SFXN1Q9H9B4 322 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 KCNK9Q9NPC2 374 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 HELLSQ9NRZ9 838 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 MAP3K20Q9NYL2 800 aaKnown RBP4.67□□□□□ -1.66
ITGB1-208ENST00000464001 PLK2Q9NYY3 685 aa4.67□□□□□ -1.66
ITGB1-208ENST00000464001 GXYLT2A0PJZ3 443 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 GAGE12JA6NER3 117 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 J3KTA2 159 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 MDM4O15151 490 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 DHHO43323 396 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 ITGA5P08648 1049 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 CD53P19397 219 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 WASHC2DQ5SRD0 308 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 ZNF324BQ6AW86 544 aaPredicted RBP4.66□□□□□ -1.66
ITGB1-208ENST00000464001 CAPRIN2Q6IMN6 1127 aaKnown RBP4.66□□□□□ -1.66
ITGB1-208ENST00000464001 HMBOX1Q6NT76 420 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 FBXO38Q6PIJ6 1188 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 SLC22A17Q8WUG5 538 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 BRI3BPQ8WY22 251 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 ISCUQ9H1K1 167 aa4.66□□□□□ -1.66
ITGB1-208ENST00000464001 WNT16Q9UBV4 365 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms