RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 FZD4Q9ULV1 537 aa17.96■□□□□ 0.47
HMGN1-209ENST00000463631 TPX2Q9ULW0 747 aaKnown RBP17.96■□□□□ 0.47
HMGN1-209ENST00000463631 CETN3O15182 167 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 SLC16A3O15427 465 aaKnown RBP17.95■□□□□ 0.46
HMGN1-209ENST00000463631 YKT6O15498 198 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 ACSL4O60488 711 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 C1SP09871 688 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 CD19P15391 556 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 HNF1BP35680 557 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 GALCP54803 685 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 IL9RQ01113 521 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 CST6Q15828 149 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 KRBA2Q6ZNG9 492 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 SKA1Q96BD8 255 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 MRGPRX3Q96LB0 322 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 SPATA32Q96LK8 384 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 PRICKLE1Q96MT3 831 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-209ENST00000463631 SLC6A18Q96N87 628 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 SERGEFQ9UGK8 458 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 ITIH6Q6UXX5 1313 aa17.95■□□□□ 0.46
HMGN1-209ENST00000463631 ZNF462Q96JM2 2506 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 LRRC72A6NJI9 287 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 RNASEH1O60930 286 aaKnown RBP17.94■□□□□ 0.46
HMGN1-209ENST00000463631 SIN3BO75182 1162 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 TBXAS1P24557 533 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-209ENST00000463631 CSKP41240 450 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 ABCG1P45844 678 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 CCR5P51681 352 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 ST8SIA6P61647 398 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 NNTQ13423 1086 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 KCNJ12Q14500 433 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 CCDC157Q569K6 752 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 LCLAT1Q6UWP7 414 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 HSCBQ8IWL3 235 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 OR2T34Q8NGX1 318 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 UBA3Q8TBC4 463 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 SAP25Q8TEE9 199 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 SLC35F5Q8WV83 523 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 DDX50Q9BQ39 737 aaKnown RBP17.94■□□□□ 0.46
HMGN1-209ENST00000463631 MTG2Q9H4K7 406 aa17.94■□□□□ 0.46
HMGN1-209ENST00000463631 INTS6Q9UL03 887 aaKnown RBP17.94■□□□□ 0.46
HMGN1-209ENST00000463631 ARID1BQ8NFD5 2236 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-209ENST00000463631 TARSL2A2RTX5 802 aaKnown RBP17.93■□□□□ 0.46
HMGN1-209ENST00000463631 TYW5A2RUC4 315 aaKnown RBP17.93■□□□□ 0.46
HMGN1-209ENST00000463631 ENC1O14682 589 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 GABBR2O75899 941 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 LTFP02788 710 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 WNT1P04628 370 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 PAEPP09466 180 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 LCP1P13796 627 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 TBX4P57082 545 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 KRT85P78386 507 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 SHBQ15464 509 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 C9orf64Q5T6V5 341 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 NADSYN1Q6IA69 706 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 GANCQ8TET4 914 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 CRELD1Q96HD1 420 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 UBL7Q96S82 380 aaPredicted RBP17.93■□□□□ 0.46
HMGN1-209ENST00000463631 EBF2Q9HAK2 575 aa17.93■□□□□ 0.46
HMGN1-209ENST00000463631 EDDM13A0A1B0GTR0 161 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 GOLGA6L7A0A1B0GV03 622 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 A0A1W2PP55 124 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 A0A1W2PQ27 194 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 A0A1W2PQ64 194 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 A0A1W2PR77 199 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 EIF4E1BA6NMX2 242 aaKnown RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 MID1O15344 667 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 RFPL3O75679 317 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 SRPRAP08240 638 aaKnown RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 CD38P28907 300 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 EPHA8P29322 1005 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 ACADVLP49748 655 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 CDH18Q13634 790 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 DCAF17Q5H9S7 520 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 TCERG1LQ5VWI1 586 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 PMF1Q6P1K2 205 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 GATAD2AQ86YP4 633 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 DHX40Q8IX18 779 aaKnown RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 SMYD4Q8IYR2 804 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 TFAP2BQ92481 460 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 SLC35C1Q96A29 364 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 CNDP2Q96KP4 475 aaKnown RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 FCRL2Q96LA5 508 aaPredicted RBP17.92■□□□□ 0.46
HMGN1-209ENST00000463631 GDF3Q9NR23 364 aa17.92■□□□□ 0.46
HMGN1-209ENST00000463631 FAM47DPA6NHR8 397 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 PLK4O00444 970 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 LATO43561 262 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 RNASEH2AO75792 299 aaKnown RBP17.91■□□□□ 0.46
HMGN1-209ENST00000463631 FBXO21O94952 628 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 LDOC1O95751 146 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-209ENST00000463631 ABCB4P21439 1286 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 ARRB1P49407 418 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-209ENST00000463631 RPS24P62847 133 aaKnown RBP17.91■□□□□ 0.46
HMGN1-209ENST00000463631 STILQ15468 1287 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 COBLL1Q53SF7 1204 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 MS4A13Q5J8X5 152 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 PITRM1Q5JRX3 1037 aa17.91■□□□□ 0.46
HMGN1-209ENST00000463631 C6orf118Q5T5N4 469 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms