RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ITIH3Q06033 890 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 SAFBQ15424 915 aaKnown RBP eCLIP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 SMN1Q16637 294 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 PRR16Q569H4 304 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MARCH8Q5T0T0 291 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MBNL2Q5VZF2 373 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 NAIF1Q69YI7 327 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GALNT17Q6IS24 598 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 PCSK4Q6UW60 755 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 METTL7BQ6UX53 244 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 TSHZ1Q6ZSZ6 1077 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GLB1L2Q8IW92 636 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LILRA3Q8N6C8 439 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MRPL43Q8N983 215 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 SUMF1Q8NBK3 374 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CLRN3Q8NCR9 226 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 OR52N2Q8NGI0 321 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GPR150Q8NGU9 434 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 OR14C36Q8NHC7 312 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MDM1Q8TC05 714 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 GPT2Q8TD30 523 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 CCDC12Q8WUD4 166 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 LMBR1Q8WVP7 490 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 RUBCNQ92622 972 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MTMR9Q96QG7 549 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MMTAG2Q9BU76 263 aaKnown RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 FTHL17Q9BXU8 183 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 TMX1Q9H3N1 280 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 ZSCAN16Q9H4T2 348 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 POMKQ9H5K3 350 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MLXIPQ9HAP2 919 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 KCNMB3Q9NPA1 279 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 WRAP73Q9P2S5 460 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-204ENST00000463622 RCOR1Q9UKL0 485 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 PCDHA7Q9UN72 937 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 TANC1Q9C0D5 1861 aa3.99□□□□□ -1.77
SCFD1-204ENST00000463622 MICAL3Q7RTP6 2002 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 ATRXP46100 2492 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 KMT2EQ8IZD2 1858 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 DOCK5Q9H7D0 1870 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CYP3A7-CYP3A51PA0A087WV96 503 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 TMEM150BA6NC51 233 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 TMEM127O75204 238 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CSPG5O95196 566 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CCNE2O96020 404 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 RPLP2P05387 115 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 LTA4HP09960 611 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 SRGAP2BP0DMP2 458 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 KCNA2P16389 499 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 XBP1P17861 261 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CYP3A7P24462 503 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 MTHFRP42898 656 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 GATMP50440 423 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 ATXN1P54253 815 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 SLC39A14Q15043 492 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 UGCGQ16739 394 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 RILPL1Q5EBL4 403 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 DCAF17Q5H9S7 520 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 B3GNT9Q6UX72 402 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 KCNK18Q7Z418 384 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 PLA2G4DQ86XP0 818 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 RNF169Q8NCN4 708 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 PROKR1Q8TCW9 393 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 KCNG4Q8TDN1 519 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 MRPS27Q92552 414 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 EPSTI1Q96J88 318 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 INPP4AQ96PE3 977 aaPredicted RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 SENP7Q9BQF6 1050 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 MXRA8Q9BRK3 442 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 UNC45AQ9H3U1 944 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 AGO4Q9HCK5 861 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 TRPM5Q9NZQ8 1165 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 WNT16Q9UBV4 365 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 DDX25Q9UHL0 483 aaKnown RBP3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CDH22Q9UJ99 828 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 KIF3AQ9Y496 699 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 CDY2AQ9Y6F7 541 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 TCHHQ07283 1943 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 SPTBN2O15020 2390 aa3.98□□□□□ -1.77
SCFD1-204ENST00000463622 TTC3P53804 2025 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 VWA3AA6NCI4 1184 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 HIDE1A8MVS5 230 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SPTLC2O15270 562 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NEMFO60524 1076 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ITGA10O75578 1167 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PSMD10O75832 226 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 YEATS4O95619 227 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 OR52Z1P0C646 297 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 BPIP17213 487 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 TGM1P22735 817 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CASP1P29466 404 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CD52P31358 61 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RNASE9P60153 205 aaKnown RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 KRT85P78386 507 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SP4Q02446 784 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 TDGQ13569 410 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms