RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HAPLN3Q96S86 360 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 GABRG3Q99928 467 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 MAGEB5Q9BZ81 275 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 TRIM7Q9C029 511 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 ABHD10Q9NUJ1 306 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 THAP10Q9P2Z0 257 aaPredicted RBP18.28■□□□□ 0.52
VPS52-214ENST00000463486 GGA2Q9UJY4 613 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 PCDHGA2Q9Y5H1 932 aa18.28■□□□□ 0.52
VPS52-214ENST00000463486 OTOGLQ3ZCN5 2332 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 EP300Q09472 2414 aaPredicted RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 IGLV3-10A0A075B6K4 115 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 WASH3PC4AMC7 463 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 F5H5T6 163 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 CCP110O43303 1012 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 LUC7L3O95232 432 aaKnown RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 NTSR1P30989 418 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 EIF4A3P38919 411 aaKnown RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 PXNP49023 591 aaPredicted RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 FNTBP49356 437 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 ZNF75DP51815 510 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 ADKP55263 362 aaKnown RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 LMAN2Q12907 356 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 EIF4HQ15056 248 aaKnown RBP18.27■□□□□ 0.52
VPS52-214ENST00000463486 CDO1Q16878 200 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 SND1Q7KZF4 910 aaKnown RBP eCLIP18.27■□□□□ 0.52
VPS52-214ENST00000463486 RASSF3Q86WH2 238 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 FAM172AQ8WUF8 416 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 SORCS1Q8WY21 1168 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 HHIPQ96QV1 700 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 SIK2Q9H0K1 926 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 PARVAQ9NVD7 372 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 ZNF212Q9UDV6 495 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 EBF1Q9UH73 591 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 SLC8A2Q9UPR5 921 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 PAXBP1Q9Y5B6 917 aa18.27■□□□□ 0.52
VPS52-214ENST00000463486 CCDC163A0A0D9SF12 145 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 TIMM44O43615 452 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 PABPC1P11940 636 aaKnown RBP18.26■□□□□ 0.51
VPS52-214ENST00000463486 NRLP54845 237 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
VPS52-214ENST00000463486 PTPRNQ16849 979 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 FUT11Q495W5 492 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 CXorf57Q6NSI4 855 aaKnown RBP18.26■□□□□ 0.51
VPS52-214ENST00000463486 WDR5BQ86VZ2 330 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 MFN1Q8IWA4 741 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 CCAR2Q8N163 923 aaKnown RBP18.26■□□□□ 0.51
VPS52-214ENST00000463486 CARNMT1Q8N4J0 409 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 CCDC185Q8N715 623 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 OR52K2Q8NGK3 314 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 WFIKKN2Q8TEU8 576 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 TTC17Q96AE7 1141 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 ALG14Q96F25 216 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 CHP1Q99653 195 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.26■□□□□ 0.51
VPS52-214ENST00000463486 CACNA2D2Q9NY47 1150 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 CNOT8Q9UFF9 292 aaKnown RBP18.26■□□□□ 0.51
VPS52-214ENST00000463486 NEU3Q9UQ49 428 aa18.26■□□□□ 0.51
VPS52-214ENST00000463486 GVINP1Q7Z2Y8 2422 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 HRO43593 1189 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 CNTN5O94779 1100 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 IL12RB1P42701 662 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 WASP42768 502 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 DGKEP52429 567 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 ALFQ53S48 1182 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 EOGTQ5NDL2 527 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 RABGAP1LQ5R372 815 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 MANEALQ5VSG8 457 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 TTC39BQ5VTQ0 682 aaPredicted RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 HEATR6Q6AI08 1181 aaKnown RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 KIAA1211LQ6NV74 962 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 ALKBH5Q6P6C2 394 aaKnown RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 CHST9Q7L1S5 443 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 TMC6Q7Z403 805 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 TRMT11Q7Z4G4 463 aaKnown RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 LONP2Q86WA8 852 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 TC2NQ8N9U0 490 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 NTAN1Q96AB6 310 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 ZNF653Q96CK0 615 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 MYO19Q96H55 970 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 MRFAP1L1Q96HT8 127 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 RPRD1AQ96P16 312 aaPredicted RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 OSBPL2Q9H1P3 480 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 TBC1D30Q9Y2I9 924 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 OR51B4Q9Y5P0 310 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 STON1Q9Y6Q2 735 aa18.25■□□□□ 0.51
VPS52-214ENST00000463486 MUC22E2RYF6 1773 aaPredicted RBP18.25■□□□□ 0.51
VPS52-214ENST00000463486 A0A1B0GVM2 712 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 SSU72P8A0A1W2PR75 194 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 TCAF2A6NFQ2 919 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 FAM72CH0Y354 149 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 APBB3O95704 486 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 MYBL1P10243 752 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 PLK1P53350 603 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 NRG1Q02297 640 aaPredicted RBP18.24■□□□□ 0.51
VPS52-214ENST00000463486 GFPT1Q06210 699 aaPredicted RBP18.24■□□□□ 0.51
VPS52-214ENST00000463486 SCAPQ12770 1279 aa18.24■□□□□ 0.51
VPS52-214ENST00000463486 ZNF234Q14588 700 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms