RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PDCD6IPQ8WUM4 868 aaKnown RBP13.97□□□□□ -0.17
C9orf3-211ENST00000463372 TNFRSF25Q93038 417 aa13.97□□□□□ -0.17
C9orf3-211ENST00000463372 COMMD8Q9NX08 183 aa13.97□□□□□ -0.17
C9orf3-211ENST00000463372 ARHGAP20Q9P2F6 1191 aa13.97□□□□□ -0.17
C9orf3-211ENST00000463372 LARSQ9P2J5 1176 aaKnown RBP13.97□□□□□ -0.17
C9orf3-211ENST00000463372 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
C9orf3-211ENST00000463372 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
C9orf3-211ENST00000463372 PRAMEF26H0Y7S4 382 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 CNTN5O94779 1100 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 ATP5BP06576 529 aaKnown RBP13.96□□□□□ -0.17
C9orf3-211ENST00000463372 SLC8A1P32418 973 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 RBP5P82980 135 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 EIF2S3LQ2VIR3 472 aaKnown RBP13.96□□□□□ -0.17
C9orf3-211ENST00000463372 B3GNT8Q7Z7M8 397 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 MMAAQ8IVH4 418 aaKnown RBP13.96□□□□□ -0.17
C9orf3-211ENST00000463372 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-211ENST00000463372 NAT6Q93015 286 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 KCNK16Q96T55 309 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 TP53TG5Q9Y2B4 290 aa13.96□□□□□ -0.17
C9orf3-211ENST00000463372 DIDO1Q9BTC0 2240 aaKnown RBP13.96□□□□□ -0.17
C9orf3-211ENST00000463372 TACC2O95359 2948 aa13.96□□□□□ -0.18
C9orf3-211ENST00000463372 CLDN5O00501 218 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 CDKL5O76039 1030 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 STC2O76061 302 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 LDLRP01130 860 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SCP2P22307 547 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 WARSP23381 471 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 RPS6KB1P23443 525 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 RPIAP49247 311 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 HNRNPKP61978 463 aaKnown RBP eCLIP13.95□□□□□ -0.186e-13■■■□□ 15
C9orf3-211ENST00000463372 GNL2Q13823 731 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 DRAP1Q14919 205 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SETMARQ53H47 684 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SLFN12LQ6IEE8 588 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SLC39A4Q6P5W5 647 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 PRR7Q8TB68 274 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SNX29Q8TEQ0 813 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 APOBEC4Q8WW27 367 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 CCDC3Q9BQI4 270 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 CALN1Q9BXU9 219 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 SNX25Q9H3E2 840 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 MTG2Q9H4K7 406 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 RUBCNLQ9H714 662 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 DNAJC28Q9NX36 388 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 IL37Q9NZH6 218 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 FOXJ2Q9P0K8 574 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 CYTH4Q9UIA0 394 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 CA5BQ9Y2D0 317 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 LOXL2Q9Y4K0 774 aa13.95□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
C9orf3-211ENST00000463372 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 FAM92AA1XBS5 289 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF891A8MT65 544 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-211ENST00000463372 K7ENM7 598 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
C9orf3-211ENST00000463372 ITIH1P19827 911 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 GNL1P36915 607 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-211ENST00000463372 PGFP49763 221 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 STK3Q13188 491 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 AAMPQ13685 434 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 FGL2Q14314 439 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 BMT2Q1RMZ1 405 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 MCEMP1Q8IX19 187 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 AHI1Q8N157 1196 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 GLMNQ92990 594 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 USP7Q93009 1102 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 IFT43Q96FT9 208 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 FOXP3Q9BZS1 431 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 DCLK3Q9C098 648 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 FBXO44Q9H4M3 255 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
C9orf3-211ENST00000463372 STMND1H3BQB6 276 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 MDM4O15151 490 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 CASC3O15234 703 aaKnown RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 RNGTTO60942 597 aaKnown RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 SIN3BO75182 1162 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 KLKB1P03952 638 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 POLR2EP19388 210 aaKnown RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 HLA-FP30511 346 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 PSMD8P48556 350 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 MAPK10P53779 464 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 ST8SIA6P61647 398 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF542PQ5EBM4 170 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 ADIPOR2Q86V24 386 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 AADATQ8N5Z0 425 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 IL22RA1Q8N6P7 574 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 ZNF548Q8NEK5 533 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 GPBAR1Q8TDU6 330 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 KCNN1Q92952 543 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 TMEM74Q96NL1 305 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
C9orf3-211ENST00000463372 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
C9orf3-211ENST00000463372 CAAP1Q9H8G2 361 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms