RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SRRDQ9UH36 339 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 SCOCQ9UIL1 159 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 TUBD1Q9UJT1 453 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 TBX20Q9UMR3 447 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 EXOC7Q9UPT5 735 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 ZMYM2Q9UBW7 1377 aa7.91□□□□□ -1.14
UBE4B-204ENST00000462658 COL1A2P08123 1366 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 ADGRA3Q8IWK6 1321 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 A0A1W2PRX2 142 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 UBE2QL1A1L167 161 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 RRN3P2A6NIE6 340 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 LRRIQ4A6NIV6 560 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 LGALS16A8MUM7 142 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SLC16A3O15427 465 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 ASAP2O43150 1006 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 C22orf31O95567 290 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 MYL3P08590 195 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SCP2P22307 547 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 PSMC2P35998 433 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 PBX1P40424 430 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 CASRP41180 1078 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 GSDMDP57764 484 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SNRPFP62306 86 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 BEX3Q00994 111 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 PPP3CAQ08209 521 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 LAMTOR4Q0VGL1 99 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 DRP2Q13474 957 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 MYBPC2Q14324 1141 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 MXD4Q14582 209 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 GAGE13Q4V321 117 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 MIIPQ5JXC2 388 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SPECC1LQ69YQ0 1117 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 FUKQ8N0W3 1084 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 LRRC71Q8N4P6 559 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 METTL13Q8N6R0 699 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 CXorf38Q8TB03 319 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SNX33Q8WV41 574 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 PRPF31Q8WWY3 499 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 PSPC1Q8WXF1 523 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 RELTQ969Z4 430 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 NDST4Q9H3R1 872 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 METTL14Q9HCE5 456 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 IL23AQ9NPF7 189 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 DMAC2Q9NW81 257 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SUCLA2Q9P2R7 463 aaPredicted RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 ZFR2Q9UPR6 939 aaKnown RBP7.9□□□□□ -1.14
UBE4B-204ENST00000462658 FRMD4BQ9Y2L6 1034 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 SPEF1Q9Y4P9 236 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 MRFAP1Q9Y605 127 aa7.9□□□□□ -1.14
UBE4B-204ENST00000462658 ANKRD63C9JTQ0 380 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 K7ERI5 159 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 SEPT4O43236 478 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 AKR1B10O60218 316 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 FOXD2O60548 495 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 NDUFS2O75306 463 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 AKAP3O75969 853 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 RARBP10826 455 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 EPB41P11171 864 aaKnown RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 TMOD1P28289 359 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 CASP4P49662 377 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 CYP2J2P51589 502 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 CLCN3P51790 818 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 MEF2AQ02078 507 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 MALLQ13021 153 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 PPFIA1Q13136 1202 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 TBX2Q13207 712 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 CAPSQ13938 189 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 TFDP1Q14186 410 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 KIAA0753Q2KHM9 967 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ANO4Q32M45 955 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 FKBP15Q5T1M5 1219 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ARMCX5Q6P1M9 558 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 MTHFD1LQ6UB35 978 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 RHPN2Q8IUC4 686 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 C12orf56Q8IXR9 622 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 FAM186BQ8IYM0 893 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 CMTM4Q8IZR5 234 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 RAET1EQ8TD07 263 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 TMEM174Q8WUU8 243 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 KAT2BQ92831 832 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ZBTB10Q96DT7 871 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF830Q96NB3 372 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 SLC13A1Q9BZW2 595 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 AASDHPPTQ9NRN7 309 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 SETD4Q9NVD3 440 aa7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ARMCX3Q9UH62 379 aaPredicted RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 MYH9P35579 1960 aaKnown RBP7.89□□□□□ -1.15
UBE4B-204ENST00000462658 ARID1BQ8NFD5 2236 aaPredicted RBP7.88□□□□□ -1.15
UBE4B-204ENST00000462658 WDR81Q562E7 1941 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 ITIH6Q6UXX5 1313 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 NRCAMQ92823 1304 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 PDE4DIPQ5VU43 2346 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 PMS2P1A4D2B8 440 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 TISP43B9A030 160 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 HAS3O00219 553 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 MTSS1O43312 755 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 EXOC3O60645 756 aa7.88□□□□□ -1.15
UBE4B-204ENST00000462658 PGK1P00558 417 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms