RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
SSB-206ENST00000461708 ACACAQ13085 2346 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 CALCAP01258 141 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 GRIA4P48058 902 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 ST8SIA6P61647 398 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 RPS24P62847 133 aaKnown RBP18.52■□□□□ 0.56
SSB-206ENST00000461708 TEAD4Q15561 434 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 HLA-BQ31612 363 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 ZNF366Q8N895 744 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 FAM149B1Q96BN6 582 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 MED15Q96RN5 788 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
SSB-206ENST00000461708 ST7Q9NRC1 585 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 TM7SF3Q9NS93 570 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 KIAA1522Q9P206 1035 aaPredicted RBP18.52■□□□□ 0.56
SSB-206ENST00000461708 NAALADL1Q9UQQ1 740 aa18.52■□□□□ 0.56
SSB-206ENST00000461708 APOBEC2Q9Y235 224 aaKnown RBP18.52■□□□□ 0.56
SSB-206ENST00000461708 ITPR1Q14643 2758 aa18.52■□□□□ 0.55
SSB-206ENST00000461708 CACNA1GO43497 2377 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 TARSL2A2RTX5 802 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 SRPRAP08240 638 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 FTH1P19P0C7X4 201 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 KRT5P13647 590 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 CD27P26842 260 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 CSKP41240 450 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 YWHAZP63104 245 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 CDH18Q13634 790 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 SYPL2Q5VXT5 272 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 TAC4Q86UU9 113 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 CHCHD4Q8N4Q1 142 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 ZNF606Q8WXB4 792 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 ZCCHC14Q8WYQ9 949 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 BIRC7Q96CA5 298 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 MRGPRX3Q96LB0 322 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 PABPC3Q9H361 631 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 THAP9Q9H5L6 903 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 UBE2TQ9NPD8 197 aaPredicted RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 STIM2Q9P246 746 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 INTS6Q9UL03 887 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 NCKAP1Q9Y2A7 1128 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 FNDC3AQ9Y2H6 1198 aaKnown RBP18.51■□□□□ 0.55
SSB-206ENST00000461708 ATRXP46100 2492 aa18.51■□□□□ 0.55
SSB-206ENST00000461708 WDFY3Q8IZQ1 3526 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 A0A1B0GVT2 93 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 BIN1O00499 593 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 CAPN9O14815 690 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 FLRT2O43155 660 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 PAPSS1O43252 624 aaPredicted RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 RNASEH1O60930 286 aaKnown RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 LUC7L3O95232 432 aaKnown RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 IGLV3-25P01717 112 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 APOEP02649 317 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 CSNK1EP49674 416 aaKnown RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 EIF4EBP2Q13542 120 aaPredicted RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 DCAF6Q58WW2 860 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 BAHD1Q8TBE0 780 aaPredicted RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 SNX19Q92543 992 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 CDC6Q99741 560 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 NUCKS1Q9H1E3 243 aaKnown RBP18.5■□□□□ 0.55
SSB-206ENST00000461708 IL21RQ9HBE5 538 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 POPDC2Q9HBU9 364 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 TM9SF3Q9HD45 589 aa18.5■□□□□ 0.55
SSB-206ENST00000461708 ITIH6Q6UXX5 1313 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 KNTC1P50748 2209 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 APC2O95996 2303 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 SRRM3A6NNA2 597 aaPredicted RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 MOCS3O95396 460 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 TRUB2O95900 331 aaKnown RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 GLI1P08151 1106 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 STX17P56962 302 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 SLC12A1Q13621 1099 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 SUZ12Q15022 739 aaKnown RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 KIF19Q2TAC6 998 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 PITRM1Q5JRX3 1037 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 C9orf64Q5T6V5 341 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 CARNMT1Q8N4J0 409 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 ADAM32Q8TC27 787 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 SETD7Q8WTS6 366 aaKnown RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 IGSF8Q969P0 613 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 MYEOVQ96EZ4 313 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSB-206ENST00000461708 ASNSD1Q9NWL6 643 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 ADAMTS1Q9UHI8 967 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 CYTH4Q9UIA0 394 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 FZD4Q9ULV1 537 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 TPX2Q9ULW0 747 aaKnown RBP18.49■□□□□ 0.55
SSB-206ENST00000461708 ERVW-1Q9UQF0 538 aa18.49■□□□□ 0.55
SSB-206ENST00000461708 NBEAQ8NFP9 2946 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 EDDM13A0A1B0GTR0 161 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 GTPBP10A4D1E9 387 aaKnown RBP18.48■□□□□ 0.55
SSB-206ENST00000461708 C10orf142B7Z368 130 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 E5RJQ4 531 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 DFNA5O60443 496 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 SIN3BO75182 1162 aa18.48■□□□□ 0.55
SSB-206ENST00000461708 CAPNS1P04632 268 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms