RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SMAD3P84022 425 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PPARDQ03181 441 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NR1H3Q13133 447 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SEPT6Q14141 434 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SPDYCQ5MJ68 293 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC9A4Q6AI14 798 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NAPEPLDQ6IQ20 393 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SPATA31D4Q6ZUB0 917 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TMEM173Q86WV6 379 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 HERC6Q8IVU3 1022 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ZDHHC14Q8IZN3 488 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SCML4Q8N228 414 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PQLC3Q8N755 202 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKRD42Q8N9B4 389 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 DEPDC1BQ8WUY9 529 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 KHSRPQ92945 711 aaKnown RBP eCLIP4.23□□□□□ -1.732e-7■□□□□ 10.7
ATP13A3-206ENST00000461660 P2RY11Q96G91 374 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SPATA17Q96L03 361 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CEP295NLQ96MC4 621 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CYTH2Q99418 400 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TCF25Q9BQ70 676 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 C11orf84Q9BUA3 381 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 OSBPL2Q9H1P3 480 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NEUROG2Q9H2A3 272 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PPCSQ9HAB8 311 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 IPO11Q9UI26 975 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TLR6Q9Y2C9 796 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SNX10Q9Y5X0 201 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ZSWIM8A7E2V4 1837 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CLUHO75153 1309 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TRIM43BA6NCK2 446 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 KCNU1A8MYU2 1149 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RIPK2O43353 540 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 GABBR2O75899 941 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TBX18O95935 607 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 C8AP07357 584 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RHOCP08134 193 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RHOQP17081 205 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 GABRR2P28476 465 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 OR1E1P30953 314 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP3CCP48454 512 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 HCAR3P49019 387 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RPL34P49207 117 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RENBPP51606 427 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 GNGT1P63211 74 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CDK16Q00536 496 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 DSG1Q02413 1049 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SCAPQ12770 1279 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CDH18Q13634 790 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CCDC38Q502W7 563 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKRD20A2Q5SQ80 823 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKRD20A1Q5TYW2 823 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 HHATQ5VTY9 493 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKRD20A3Q5VUR7 823 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC8B1Q6J4K2 584 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ZDHHC24Q6UX98 284 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TAS1R1Q7RTX1 841 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 DNAJB7Q7Z6W7 309 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 DDX53Q86TM3 631 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 LRRC49Q8IUZ0 686 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SH2D3CQ8N5H7 860 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PPM1NQ8N819 430 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NETO2Q8NC67 525 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 KREMEN2Q8NCW0 462 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 IPMKQ8NFU5 416 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TRIM43Q96BQ3 446 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PGAP3Q96FM1 320 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SMC6Q96SB8 1091 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CORO1BQ9BR76 489 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NAT9Q9BTE0 207 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CAPS2Q9BXY5 557 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ROPN1BQ9BZX4 212 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NSRP1Q9H0G5 558 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 MUC3BQ9H195 1237 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 CNOT10Q9H9A5 744 aaKnown RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 KIF9Q9HAQ2 790 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ROPN1Q9HAT0 212 aaPredicted RBP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ETNK1Q9HBU6 452 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 PRDM10Q9NQV6 1147 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TMPRSS4Q9NRS4 437 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ETNK2Q9NVF9 386 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 RBM22Q9NW64 420 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 NINJ2Q9NZG7 142 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 MPP6Q9NZW5 540 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 ASB3Q9Y575 518 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 INSL5Q9Y5Q6 135 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 USP3Q9Y6I4 520 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 MGAMO43451 1857 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 SIP14410 1827 aa4.23□□□□□ -1.73
ATP13A3-206ENST00000461660 TRAV19A0A0A6YYK7 116 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 IQANK1A0A1B0GTG1 560 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ERICH4A6NGS2 130 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 HHLA1C9JL84 531 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 E9PAM4 449 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 H0Y626 953 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 H3BQF6 201 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ADAM12O43184 909 aa4.22□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP9BO43861 1147 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms