RNA–Protein interactions for RNA: ENST00000461283.5

RBM39-221, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 2,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-221ENST00000461283 PAFAH1B1P43034 410 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SLC6A9P48067 706 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 CD97P48960 835 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 HDAC4P56524 1084 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 HPCAP84074 193 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SLC13A2Q13183 592 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 CTBP1Q13363 440 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SPIDRQ14159 915 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 RCN2Q14257 317 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 KCNJ12Q14500 433 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 TCP11X2Q5H9J9 407 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PHF19Q5T6S3 580 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 TBC1D9BQ66K14 1250 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 RAP1GAP2Q684P5 730 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 CNKSR3Q6P9H4 555 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 DSTYKQ6XUX3 929 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SEPT14Q6ZU15 432 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 Q6ZVL8 140 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 ZNF365Q70YC5 407 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 RNF44Q7L0R7 432 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 KDELC2Q7Z4H8 507 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 HOOK3Q86VS8 718 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PALB2Q86YC2 1186 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SRBD1Q8N5C6 995 aaKnown RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 NAT16Q8N8M0 369 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 STKLD1Q8NE28 680 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 DLG3Q92796 817 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 GATA6Q92908 595 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 TEKT1Q969V4 418 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 LENG1Q96BZ8 264 aaPredicted RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 PPP1R14BQ96C90 147 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 ZNF653Q96CK0 615 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 DHTKD1Q96HY7 919 aaPredicted RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 IFT74Q96LB3 600 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PTCHD1Q96NR3 888 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PSMG3-AS1Q96PY0 264 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 KRT12Q99456 494 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 TLR10Q9BXR5 811 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 TTYH3Q9C0H2 523 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SENP6Q9GZR1 1112 aaPredicted RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 ISCUQ9H1K1 167 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PRO3102Q9H379 93 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 NHEJ1Q9H9Q4 299 aaPredicted RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 CYP4F12Q9HCS2 524 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 KCNH7Q9NS40 1196 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 COQ3Q9NZJ6 369 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 AFF4Q9UHB7 1163 aaKnown RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 FBXL5Q9UKA1 691 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 DENND2AQ9ULE3 1009 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 PAIP2BQ9ULR5 123 aaKnown RBP3.3□□□□□ -1.88
RBM39-221ENST00000461283 CAPN11Q9UMQ6 739 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 CHMP2BQ9UQN3 213 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 NAALADL1Q9UQQ1 740 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 SH3GLB1Q9Y371 365 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 HS3ST4Q9Y661 456 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 COMMD3-BMI1R4GMX3 469 aa3.3□□□□□ -1.88
RBM39-221ENST00000461283 MYH7BA7E2Y1 1941 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 STK36Q9NRP7 1315 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MYH14Q7Z406 1995 aaKnown RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 UBA6A0AVT1 1052 aaPredicted RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 PRAMEF22A3QJZ6 481 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 TRIM43BA6NCK2 446 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 ADARB2-AS1A8MUL3 147 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 STX16-NPEPL1H3BU86 382 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MASP2O00187 686 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 STX16O14662 325 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 CETN3O15182 167 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 FGF10O15520 208 aaPredicted RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 DAPK3O43293 454 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 DNPH1O43598 174 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 DKC1O60832 514 aaKnown RBP eCLIP3.29□□□□□ -1.88
RBM39-221ENST00000461283 NTRK1P04629 796 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MTHFD2P13995 350 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MYL6BP14649 208 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 IDO1P14902 403 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 CAP2P40123 477 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MCAMP43121 646 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 MMP13P45452 471 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 PREPP48147 710 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 AFF3P51826 1226 aaKnown RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 PPP5CP53041 499 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 COPAP53621 1224 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 RTP1P59025 263 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 RPL11P62913 178 aaKnown RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 UBXN1Q04323 297 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 TLE2Q04725 743 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 SPIRE1Q08AE8 756 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 C17orf67Q0P5P2 114 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 DCTN2Q13561 401 aaKnown RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 EIF4A2Q14240 407 aaKnown RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 GAS6Q14393 721 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 NFIXQ14938 502 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 CLPPQ16740 277 aaPredicted RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 PARP6Q2NL67 630 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 KRT71Q3SY84 523 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 LRRC24Q50LG9 513 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 ZNF362Q5T0B9 420 aaPredicted RBP3.29□□□□□ -1.88
RBM39-221ENST00000461283 SNX30Q5VWJ9 437 aa3.29□□□□□ -1.88
RBM39-221ENST00000461283 PRAMEF18Q5VWM3 479 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms