RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 LINC01565O15544 149 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ZSCAN12O43309 604 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 SOAT2O75908 522 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 BEST1O76090 585 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 NDUFA10O95299 355 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 PAPLNO95428 1278 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 VNN2O95498 520 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 LTFP02788 710 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 RHOP08100 348 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 CCDC175P0C221 793 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 USP17L7P0C7H9 530 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 FAM228BP0C875 321 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 SLC2A3P11169 496 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 UNGP13051 313 aaPredicted RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 HDCP19113 662 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 NME2P22392 152 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 GBP2P32456 591 aaPredicted RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 GTF2F1P35269 517 aaKnown RBP eCLIP6.2□□□□□ -1.42
NUP98-208ENST00000461047 AVPR1AP37288 418 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 RPL34P49207 117 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 GPR15P49685 360 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 TUBP50607 506 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 CDR1P51861 262 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 EPHA5P54756 1037 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 NAP1L1P55209 391 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 COG7P83436 770 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 GFPT1Q06210 699 aaPredicted RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 KIF5AQ12840 1032 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 SMAD4Q13485 552 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 KCNC3Q14003 757 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 COL19A1Q14993 1142 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 C10orf120Q5SQS8 335 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 FAM102AQ5T9C2 384 aaPredicted RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 SDHAF4Q5VUM1 108 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 BSPRYQ5W0U4 402 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 WDR59Q6PJI9 974 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 MMS22LQ6ZRQ5 1243 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 BEND5Q7L4P6 421 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ARCQ7LC44 396 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 DDX42Q86XP3 938 aaKnown RBP eCLIP6.2□□□□□ -1.42
NUP98-208ENST00000461047 RHOT2Q8IXI1 618 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 MCOLN2Q8IZK6 566 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ZNF276Q8N554 614 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 WDTC1Q8N5D0 677 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 TTC9BQ8N6N2 239 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 C12orf76Q8N812 135 aaPredicted RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 C3orf20Q8ND61 904 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 SCAMP5Q8TAC9 235 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 SLC30A5Q8TAD4 765 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ZNF653Q96CK0 615 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 PPP1R9BQ96SB3 815 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 PCDHB18PQ96TA0 734 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 CHP1Q99653 195 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 DDX50Q9BQ39 737 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 C11orf70Q9BRQ4 267 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ULBP1Q9BZM6 244 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 TSGA10Q9BZW7 698 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 CEP44Q9C0F1 390 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ISCUQ9H1K1 167 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 TASP1Q9H6P5 420 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 POPDC2Q9HBU9 364 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 TRPC7Q9HCX4 862 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 THG1LQ9NWX6 298 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 DNMT3BQ9UBC3 853 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 ZC3H7BQ9UGR2 993 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 LSM7Q9UK45 103 aaKnown RBP6.2□□□□□ -1.42
NUP98-208ENST00000461047 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
NUP98-208ENST00000461047 ANK1P16157 1881 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 PDCD11Q14690 1871 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 FAM92AA1XBS5 289 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ZNF840PA6NDX5 716 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 GOLGA6L9A6NEM1 432 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SIGLEC16A6NMB1 481 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 HHLA1C9JL84 531 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MYO1FO00160 1098 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 SLC9A3R1O14745 358 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 KRT86O43790 486 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 TLR5O60602 858 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 RNF8O76064 485 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 LCA5LO95447 670 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CALCAP01258 141 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 ERBB2P04626 1255 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 CKMP06732 381 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 PLEKP08567 350 aaPredicted RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 TMEM253P0C7T8 217 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 NCAM1P13591 858 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 RARGP13631 454 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 HMGA1P17096 107 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 ABCB4P21439 1286 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MSNP26038 577 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 SDC4P31431 198 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 MATKP42679 507 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 NOP2P46087 812 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 HARS2P49590 506 aaKnown RBP6.19□□□□□ -1.42
NUP98-208ENST00000461047 GALCP54803 685 aa6.19□□□□□ -1.42
NUP98-208ENST00000461047 DAOAP59103 153 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms