RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 SIN3BO75182 1162 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 MT-CO3P00414 261 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 HLA-DRAP01903 254 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 ATP5BP06576 529 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 YWHAGP61981 247 aaKnown RBP eCLIP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 CST6Q15828 149 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 HNRNPA1L2Q32P51 320 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 RAB41Q5JT25 222 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 C1orf220Q5T0J3 134 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 LURAP1LQ8IV03 231 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 DHX40Q8IX18 779 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 SERAC1Q96JX3 654 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 LMLNQ96KR4 655 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 USP28Q96RU2 1077 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 C7orf25Q9BPX7 421 aa12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 APOBEC3GQ9HC16 384 aaKnown RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.1□□□□□ -0.47
PCYT1A-213ENST00000460827 TRIM38O00635 465 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 LATO43561 262 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 SIGLEC6O43699 453 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 RNASEH2AO75792 299 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 MPOP05164 745 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 POLR2EP19388 210 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 TRIM21P19474 475 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 CASP1P29466 404 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 HARS2P49590 506 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 ZNF445P59923 1031 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 C9orf64Q5T6V5 341 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 BROXQ5VW32 411 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 PM20D1Q6GTS8 502 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 ARHGAP18Q8N392 663 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 OXR1Q8N573 874 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 AADATQ8N5Z0 425 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 MFSD2AQ8NA29 543 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 NDRG1Q92597 394 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 TTC17Q96AE7 1141 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 MED8Q96G25 268 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 MRGPRX3Q96LB0 322 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 SLC39A2Q9NP94 309 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 ASCL3Q9NQ33 180 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 FZD4Q9ULV1 537 aa12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 HBS1LQ9Y450 684 aaKnown RBP12.09□□□□□ -0.47
PCYT1A-213ENST00000460827 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 SLC28A2O43868 658 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 KRT10P13645 584 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 CD58P19256 250 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 SLC8A1P32418 973 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 PIK3CAP42336 1068 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 ADPRHP54922 357 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 PPP2CBP62714 309 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 PPP2CAP67775 309 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 E2F1Q01094 437 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 AMPD3Q01432 767 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 VAC14Q08AM6 782 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 ZNF211Q13398 564 aaPredicted RBP12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 MPP7Q5T2T1 576 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 CDCP2Q5VXM1 449 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 RFWD3Q6PCD5 774 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 PIGZQ86VD9 579 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 SLC9A9Q8IVB4 645 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 DHX58Q96C10 678 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 OMDQ99983 421 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 ARHGAP20Q9P2F6 1191 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 SFMBT1Q9UHJ3 866 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 INTS6Q9UL03 887 aaKnown RBP12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
PCYT1A-213ENST00000460827 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 IKBKBO14920 756 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 KLK10O43240 276 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 RNASEH1O60930 286 aaKnown RBP12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 SDC3O75056 442 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 LATS1O95835 1130 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 ZBED1O96006 694 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 SLFN14P0C7P3 912 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 GOT1P17174 413 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 LSSP48449 732 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 TKTL1P51854 596 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 ERVPABLB-1P60509 514 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 GABREP78334 506 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 SFSWAPQ12872 951 aaKnown RBP12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 PIK3R6Q5UE93 754 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
PCYT1A-213ENST00000460827 SLC25A45Q8N413 288 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms