RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 TTC39BQ5VTQ0 682 aaPredicted RBP13.25□□□□□ -0.29
MECP2-206ENST00000460227 TXNRD3NBQ6F5E7 133 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 FSTL4Q6MZW2 842 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 ZNF662Q6ZS27 426 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 KIAA0907Q7Z7F0 614 aaPredicted RBP13.25□□□□□ -0.29
MECP2-206ENST00000460227 KIAA1328Q86T90 577 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 SUGP1Q8IWZ8 645 aaKnown RBP13.25□□□□□ -0.29
MECP2-206ENST00000460227 TXLNBQ8N3L3 684 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 HJURPQ8NCD3 748 aaPredicted RBP13.25□□□□□ -0.29
MECP2-206ENST00000460227 TPCN2Q8NHX9 752 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 EXOC4Q96A65 974 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 RPRD1AQ96P16 312 aaPredicted RBP13.25□□□□□ -0.29
MECP2-206ENST00000460227 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 TBC1D17Q9HA65 648 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 LTB4R2Q9NPC1 389 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 STIM2Q9P246 746 aa13.25□□□□□ -0.29
MECP2-206ENST00000460227 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 K7EQS6 105 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 BUB1BO60566 1050 aaPredicted RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 CLDN11O75508 207 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 CNTN5O94779 1100 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 LRIG2O94898 1065 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 KAT7O95251 611 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 PTMAP06454 111 aaKnown RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 RARAP10276 462 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 TARSP26639 723 aaKnown RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 TNFRSF4P43489 277 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 DGKGP49619 791 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 IRAK1P51617 712 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 CLCN5P51795 746 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 CDH4P55283 916 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 TAS2R40P59535 323 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
MECP2-206ENST00000460227 CCINQ13939 588 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 HADHQ16836 314 aaKnown RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 ALFQ53S48 1182 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 EFHC2Q5JST6 749 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 CHST9Q7L1S5 443 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.24□□□□□ -0.29
MECP2-206ENST00000460227 TEKT4Q8WW24 435 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 EZH1Q92800 747 aaPredicted RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 CLDN23Q96B33 292 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 FOXQ1Q9C009 403 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 LMAN1LQ9HAT1 526 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 C11orf16Q9NQ32 467 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 DNAJC17Q9NVM6 304 aaKnown RBP13.24□□□□□ -0.29
MECP2-206ENST00000460227 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 ZNF212Q9UDV6 495 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 AP4E1Q9UPM8 1137 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 SIT1Q9Y3P8 196 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 MYO16Q9Y6X6 1858 aa13.24□□□□□ -0.29
MECP2-206ENST00000460227 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 TYW5A2RUC4 315 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 TBC1D3BA6NDS4 549 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 STK25O00506 426 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 BUB1O43683 1085 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 PI15O43692 258 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 GPR37L1O60883 481 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 LUC7L3O95232 432 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 EGFP01133 1207 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 COMTP21964 271 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 IL4RP24394 825 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 HLA-FP30511 346 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 HOXC13P31276 330 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 HCAR3P49019 387 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 ARSEP51690 589 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 ZNF177Q13360 481 aaPredicted RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 DPYSL2Q16555 572 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 LRRC38Q5VT99 294 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 GRAMD4Q6IC98 578 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 NLRP14Q86W24 1093 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 SFTPA1Q8IWL2 248 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 CCAR2Q8N163 923 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 SYNPOQ8N3V7 929 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 RNF10Q8N5U6 811 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 ZNF557Q8N988 423 aaPredicted RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 WFDC5Q8TCV5 224 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 PBXIP1Q96AQ6 731 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 ZYG11BQ9C0D3 744 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 DHX35Q9H5Z1 703 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
MECP2-206ENST00000460227 NEU3Q9UQ49 428 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
MECP2-206ENST00000460227 STARD13Q9Y3M8 1113 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms