RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SLC6A4P31645 630 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 C21orf59P57076 290 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 CST6Q15828 149 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 COBLL1Q53SF7 1204 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 RFWD3Q6PCD5 774 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 DHRS13Q6UX07 377 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 MARCH9Q86YJ5 346 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 UBA3Q8TBC4 463 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 SKA1Q96BD8 255 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 LRIG1Q96JA1 1093 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 MRGPRX3Q96LB0 322 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 PRICKLE1Q96MT3 831 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-227ENST00000458564 ELF4Q99607 663 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-227ENST00000458564 FBXL12Q9NXK8 326 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 SERGEFQ9UGK8 458 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 INTS6Q9UL03 887 aaKnown RBP10.83□□□□□ -0.68
HDLBP-227ENST00000458564 NCKAP1Q9Y2A7 1128 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
HDLBP-227ENST00000458564 TARSL2A2RTX5 802 aaKnown RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 TYW5A2RUC4 315 aaKnown RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 LRRC72A6NJI9 287 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 KCNK3O14649 394 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 PMM2O15305 246 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 RNASEH1O60930 286 aaKnown RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 SIN3BO75182 1162 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 LTFP02788 710 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 C1SP09871 688 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 CSKP41240 450 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 CCR5P51681 352 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 GALCP54803 685 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 ST8SIA6P61647 398 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 KCNJ12Q14500 433 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 STILQ15468 1287 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 DCAF17Q5H9S7 520 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 NADSYN1Q6IA69 706 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 PMF1Q6P1K2 205 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 NCEH1Q6PIU2 408 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 SMYD4Q8IYR2 804 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 OR2T34Q8NGX1 318 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 SAP25Q8TEE9 199 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 TFAP2BQ92481 460 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 SLC35C1Q96A29 364 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 NXPE2Q96DL1 559 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 HSFY1Q96LI6 401 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 DDX50Q9BQ39 737 aaKnown RBP10.82□□□□□ -0.68
HDLBP-227ENST00000458564 GOLPH3LQ9H4A5 285 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 MTG2Q9H4K7 406 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 EBF2Q9HAK2 575 aa10.82□□□□□ -0.68
HDLBP-227ENST00000458564 EDDM13A0A1B0GTR0 161 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 GOLGA6L7A0A1B0GV03 622 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 A0A1W2PR77 199 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 ENC1O14682 589 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 MID1O15344 667 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 LATO43561 262 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 RFPL3O75679 317 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 FBXO21O94952 628 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 ZNF202O95125 648 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 WNT1P04628 370 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 SRPRAP08240 638 aaKnown RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 LCP1P13796 627 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 CD38P28907 300 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 EPHA8P29322 1005 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 HNF1BP35680 557 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 ABCG1P45844 678 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 ACADVLP49748 655 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 TBX4P57082 545 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 FKBP3Q00688 224 aaKnown RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 IL9RQ01113 521 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 CDH18Q13634 790 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 SHBQ15464 509 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 CNGA2Q16280 664 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 BEND5Q7L4P6 421 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 TSC1Q92574 1164 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 FAM131CQ96AQ9 280 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 MYEOVQ96EZ4 313 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 SLC39A13Q96H72 371 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 CCDC34Q96HJ3 373 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 SERPINB11Q96P15 392 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 ZSWIM1Q9BR11 485 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 SCAND2PQ9GZW5 306 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-227ENST00000458564 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 GDF3Q9NR23 364 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 TLR6Q9Y2C9 796 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 PLXNA2O75051 1894 aa10.81□□□□□ -0.68
HDLBP-227ENST00000458564 PTPRQQ9UMZ3 2332 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 A0A1W2PP55 124 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 FAM47DPA6NHR8 397 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 M0QYV0 167 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 PLK4O00444 970 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 SART1O43290 800 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 RNASEH2AO75792 299 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 LUC7L3O95232 432 aaKnown RBP10.8□□□□□ -0.68
HDLBP-227ENST00000458564 ADH1BP00325 375 aa10.8□□□□□ -0.68
HDLBP-227ENST00000458564 FYNP06241 537 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms