RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 GABRG3Q99928 467 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 HS3ST4Q9Y661 456 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 OTOGLQ3ZCN5 2332 aa19.31■□□□□ 0.68
USP39-209ENST00000458268 USP34Q70CQ2 3546 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 MOCS3O95396 460 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 ATP5BP06576 529 aaKnown RBP19.3■□□□□ 0.68
USP39-209ENST00000458268 RETP07949 1114 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 SKILP12757 684 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 PDGFRAP16234 1089 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 SDC4P31431 198 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 CSKP41240 450 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 IRAK1P51617 712 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 AUHQ13825 339 aaKnown RBP19.3■□□□□ 0.68
USP39-209ENST00000458268 PLK5Q496M5 336 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 TDRD12Q587J7 1177 aaKnown RBP19.3■□□□□ 0.68
USP39-209ENST00000458268 MPP7Q5T2T1 576 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 FBXL22Q6P050 247 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 DNAJC24Q6P3W2 148 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 C14orf80Q86SX3 495 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 ADIPOR2Q86V24 386 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 CCAR2Q8N163 923 aaKnown RBP19.3■□□□□ 0.68
USP39-209ENST00000458268 ZNF557Q8N988 423 aaPredicted RBP19.3■□□□□ 0.68
USP39-209ENST00000458268 FIBINQ8TAL6 211 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 IGSF8Q969P0 613 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 TMEM59LQ9UK28 342 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
USP39-209ENST00000458268 TIMM44O43615 452 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 RHOBTB1O94844 696 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 F9P00740 461 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 KRT3P12035 628 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 RDXP35241 583 aaKnown RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 CXCR3P49682 368 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 CREB5Q02930 508 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 KLHL30Q0D2K2 578 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 EIF4EBP2Q13542 120 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 RAB6CQ53S08 254 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 PITRM1Q5JRX3 1037 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 BRMS1LQ5PSV4 323 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 RNF219Q5W0B1 726 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 E4F1Q66K89 784 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 IRF2BP2Q7Z5L9 587 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 DNAAF5Q86Y56 855 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 PRMT1Q99873 361 aaKnown RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 IRX2Q9BZI1 471 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 RAB6CQ9H0N0 254 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 DUSP15Q9H1R2 295 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 SMOC1Q9H4F8 434 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 HAUS4Q9H6D7 363 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 CD93Q9NPY3 652 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 ANLNQ9NQW6 1124 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 TAS2R14Q9NYV8 317 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 MYO6Q9UM54 1294 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 CEP192Q8TEP8 1941 aa19.29■□□□□ 0.68
USP39-209ENST00000458268 MUC22E2RYF6 1773 aaPredicted RBP19.29■□□□□ 0.68
USP39-209ENST00000458268 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 A0A1B0GVM2 712 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 ANKRD62A6NC57 917 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 TCAF2A6NFQ2 919 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 ATMINO43313 823 aaPredicted RBP19.28■□□□□ 0.68
USP39-209ENST00000458268 SRGAP2O75044 1071 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 DLDP09622 509 aaKnown RBP19.28■□□□□ 0.68
USP39-209ENST00000458268 CTSOP43234 321 aaPredicted RBP19.28■□□□□ 0.68
USP39-209ENST00000458268 PTP4A2Q12974 167 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 E2F5Q15329 346 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 SH3PXD2AQ5TCZ1 1133 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 MON1BQ7L1V2 547 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 PHF13Q86YI8 300 aaPredicted RBP19.28■□□□□ 0.68
USP39-209ENST00000458268 TMEFF1Q8IYR6 380 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 APCDD1Q8J025 514 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.28■□□□□ 0.68
USP39-209ENST00000458268 MCEEQ96PE7 176 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 MTG2Q9H4K7 406 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 PRDM16Q9HAZ2 1276 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 PARD6AQ9NPB6 346 aa19.28■□□□□ 0.68
USP39-209ENST00000458268 KIAA1522Q9P206 1035 aaPredicted RBP19.28■□□□□ 0.68
USP39-209ENST00000458268 CKAP5Q14008 2032 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 NPC1O15118 1278 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 GPD1P21695 349 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 P2RY2P41231 377 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 RPL6Q02878 288 aaKnown RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 ZNF177Q13360 481 aaPredicted RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 BYSLQ13895 437 aaKnown RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 TTC39BQ5VTQ0 682 aaPredicted RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 ACAD10Q6JQN1 1059 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 DCUN1D2Q6PH85 259 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 LRRC31Q6UY01 552 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 MRGPRX1Q96LB2 322 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.27■□□□□ 0.68
USP39-209ENST00000458268 XPO4Q9C0E2 1151 aaKnown RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 ARHGEF38Q9NXL2 777 aa19.27■□□□□ 0.68
USP39-209ENST00000458268 INTS6Q9UL03 887 aaKnown RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.68
USP39-209ENST00000458268 NUP205Q92621 2012 aa19.27■□□□□ 0.67
USP39-209ENST00000458268 ATXN2Q99700 1313 aaKnown RBP19.26■□□□□ 0.67
USP39-209ENST00000458268 CNTN5O94779 1100 aa19.26■□□□□ 0.67
USP39-209ENST00000458268 EPN2O95208 641 aa19.26■□□□□ 0.67
USP39-209ENST00000458268 TPM3P06753 285 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms