RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ATICP31939 592 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 KYAT3Q6YP21 454 aaKnown RBP20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 DCLK2Q8N568 766 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 OR52B2Q96RD2 323 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 CAMKK2Q96RR4 588 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 ASB7Q9H672 318 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 COG4Q9H9E3 785 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 SNX15Q9NRS6 342 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 COPG2Q9UBF2 871 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 POMPQ9Y244 141 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 PTPRFP10586 1907 aa20.09■□□□□ 0.81
CNEP1R1-203ENST00000458059 A0A0A0MRY4 1105 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 MDM4O15151 490 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 ITGAXP20702 1163 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 SULT1E1P49888 294 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 KCTD2Q14681 263 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 RBBP5Q15291 538 aaKnown RBP20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 HSP90AA5PQ58FG0 334 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 FAM91A1Q658Y4 838 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 ARCQ7LC44 396 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 PLPPR4Q7Z2D5 763 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 DEFB106AQ8N104 65 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 GALNT15Q8N3T1 639 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 SLC2A14Q8TDB8 520 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 SPATA13Q96N96 652 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 PRDM12Q9H4Q4 367 aa20.08■□□□□ 0.81
CNEP1R1-203ENST00000458059 MYOCOSA0A1B0GUC4 107 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 CAPN8A6NHC0 703 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 CLDN5O00501 218 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 OR6B1O95007 311 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 LTFP02788 710 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 CHRNGP07510 517 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 CPA3P15088 417 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 ACAT1P24752 427 aaKnown RBP20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 RPS12P25398 132 aaKnown RBP20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 AVPR1AP37288 418 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 SEMA5AQ13591 1074 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM219BQ5XKK7 198 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 SPATA6LQ8N4H0 392 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.08■□□□□ 0.86e-7■■■□□ 17
CNEP1R1-203ENST00000458059 USP13Q92995 863 aaPredicted RBP20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 SLC4A5Q9BY07 1137 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 EIF2AQ9BY44 585 aaKnown RBP20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 GJD2Q9UKL4 321 aa20.08■□□□□ 0.8
CNEP1R1-203ENST00000458059 GAS2O43903 313 aaKnown RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TCN1P20061 433 aaPredicted RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TPSB2P20231 275 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 NDUFV1P49821 464 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ABCE1P61221 599 aaKnown RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ROR2Q01974 943 aaKnown RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 MSLNQ13421 630 aaPredicted RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TPSAB1Q15661 275 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 DPYSL2Q16555 572 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 STRA8Q7Z7C7 330 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 MFSD3Q96ES6 412 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ERAP1Q9NZ08 941 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 CITO14578 2027 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TSPAN1O60635 241 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 RAB27AP51159 221 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 PKNOX1P55347 436 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TNFAIP2Q03169 654 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 NIPAL4Q0D2K0 466 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 MMEL1Q495T6 779 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 TMEM110Q86TL2 294 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 AFG1LQ8WV93 481 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 KLHL8Q9P2G9 620 aaPredicted RBP20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 CRABP2P29373 138 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 NUDT2P50583 147 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 CNPY1Q3B7I2 92 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ZNF567Q8N184 647 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 ITGA11Q9UKX5 1188 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 PCDHGB4Q9UN71 923 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 FIS1Q9Y3D6 152 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 PCDHGB5Q9Y5G0 923 aa20.07■□□□□ 0.8
CNEP1R1-203ENST00000458059 LGALS2P05162 132 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 GSTA2P09210 222 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 CALRP27797 417 aaKnown RBP20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 EPHA3P29320 983 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 MAGEA6P43360 314 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 BAG6P46379 1132 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 ADIGQ0VDE8 80 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 IFRD2Q12894 506 aaPredicted RBP20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 MED21Q13503 144 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 TMEM198Q66K66 360 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 NXNQ6DKJ4 435 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 LENG8Q96PV6 779 aaPredicted RBP20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 KLHL2O95198 593 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 MPSTP25325 297 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 MARK2Q7KZI7 788 aaKnown RBP20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 PDP2Q9P2J9 529 aa20.06■□□□□ 0.8
CNEP1R1-203ENST00000458059 SSC5DA1L4H1 1573 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 DPYSL4O14531 572 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 GRIA2P42262 883 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 PKDCCQ504Y2 493 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 CERCAMQ5T4B2 595 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 TMCO4Q5TGY1 634 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 PPP2R3CQ969Q6 453 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms