RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PDLIM2Q96JY6 352 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 RPRD1AQ96P16 312 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-215ENST00000457039 NCAPGQ9BPX3 1015 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 STIM2Q9P246 746 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 TFR2Q9UP52 801 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 NEU3Q9UQ49 428 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 ZDBF2Q9HCK1 2354 aa14.59□□□□□ -0.07
SMPD4-215ENST00000457039 A0A0A6YYK5 440 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 TYW5A2RUC4 315 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 PRRT4C9JH25 899 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 E9PAM4 449 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 FAM72CH0Y354 149 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 PROSCO94903 275 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 IL1R2P27930 398 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 HLA-FP30511 346 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 AVPR2P30518 371 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 MAGEA9P43362 315 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 HADHBP55084 474 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 SLC25A11Q02978 314 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 SEMA3BQ13214 749 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 GEN1Q17RS7 908 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 FBXO43Q4G163 708 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 PREPLQ4J6C6 727 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 ALFQ53S48 1182 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 FAM72AQ5TYM5 149 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 FAM72DQ6L9T8 149 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CHST9Q7L1S5 443 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 FAM72BQ86X60 149 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CIR1Q86X95 450 aaPredicted RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 MFN1Q8IWA4 741 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CCAR2Q8N163 923 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CCDC112Q8NEF3 446 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 CHRDQ9H2X0 955 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 LUC7LQ9NQ29 371 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 PPARGC1AQ9UBK2 798 aaKnown RBP14.58□□□□□ -0.08
SMPD4-215ENST00000457039 ZNF212Q9UDV6 495 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 OR12D3Q9UGF7 316 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 PCSK1NQ9UHG2 260 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 LCMT1Q9UIC8 334 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 HCN2Q9UL51 889 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 USP18Q9UMW8 372 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 STARD13Q9Y3M8 1113 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 KMT2EQ8IZD2 1858 aa14.58□□□□□ -0.08
SMPD4-215ENST00000457039 A0A1B0GVM2 712 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 PJA2O43164 708 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 PRPSAP2O60256 369 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CNTN5O94779 1100 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 LRIG2O94898 1065 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 IPO7O95373 1038 aaKnown RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 HOXC13P31276 330 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 L1CAMP32004 1257 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 MAN1A1P33908 653 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 ARHGAP25P42331 645 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 TNFRSF4P43489 277 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 KIR2DL1P43626 348 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 VAV2P52735 878 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CCZ1BP86790 482 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CCZ1P86791 482 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 LMAN2Q12907 356 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CA9Q16790 459 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 FSCBQ5H9T9 825 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 EFHC2Q5JST6 749 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CXorf57Q6NSI4 855 aaKnown RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 Q6ZS52 159 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 ANKS1BQ7Z6G8 1248 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 PYROXD2Q8N2H3 581 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 CARNMT1Q8N4J0 409 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 ZNF557Q8N988 423 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 SNRNP25Q9BV90 132 aaKnown RBP14.57□□□□□ -0.08
SMPD4-215ENST00000457039 SALL4Q9UJQ4 1053 aa14.57□□□□□ -0.08
SMPD4-215ENST00000457039 TBC1D3BA6NDS4 549 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 BTNL10A8MVZ5 291 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 ARHGAP6O43182 974 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 SRGAP2O75044 1071 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 RNF40O75150 1001 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 CLDN11O75508 207 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 PABPC1P11940 636 aaKnown RBP14.56□□□□□ -0.08
SMPD4-215ENST00000457039 CD70P32970 193 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 CDH4P55283 916 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 KRT83P78385 493 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 CDH18Q13634 790 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 BOLA3Q53S33 107 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 TMEM215Q68D42 235 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 TXNRD3NBQ6F5E7 133 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 PKN3Q6P5Z2 889 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 NLRP14Q86W24 1093 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 USP33Q8TEY7 942 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 DESI2Q9BSY9 194 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 IER2Q9BTL4 223 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 ZYG11BQ9C0D3 744 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 LACRTQ9GZZ8 138 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 ABCB8Q9NUT2 735 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 GPATCH2LQ9NWQ4 482 aa14.56□□□□□ -0.08
SMPD4-215ENST00000457039 MPP6Q9NZW5 540 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms