RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ATXN2Q99700 1313 aaKnown RBP16.77■□□□□ 0.28
CPSF6-203ENST00000456847 DLDP09622 509 aaKnown RBP16.77■□□□□ 0.28
CPSF6-203ENST00000456847 ACADMP11310 421 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 SCNN1AP37088 669 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 ST8SIA6P61647 398 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 MTA1Q13330 715 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 EIF4EBP2Q13542 120 aaPredicted RBP16.77■□□□□ 0.28
CPSF6-203ENST00000456847 TTC39BQ5VTQ0 682 aaPredicted RBP16.77■□□□□ 0.28
CPSF6-203ENST00000456847 ERMP1Q7Z2K6 904 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 TMPRSS6Q8IU80 811 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 SIPA1Q96FS4 1042 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 ERGIC2Q96RQ1 377 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 HSD3B7Q9H2F3 369 aa16.77■□□□□ 0.28
CPSF6-203ENST00000456847 KIAA1522Q9P206 1035 aaPredicted RBP16.77■□□□□ 0.28
CPSF6-203ENST00000456847 ASLP04424 464 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 CSKP41240 450 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PTGER3P43115 390 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 ATXN1P54253 815 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 FMO1Q01740 532 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 DEUP1Q05D60 604 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 TRIM72Q6ZMU5 477 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 CIR1Q86X95 450 aaPredicted RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 RPRD1AQ96P16 312 aaPredicted RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 NPY6RQ99463 290 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 SEPT11Q9NVA2 429 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 NYNRINQ9P2P1 1898 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 SPTBN4Q9H254 2564 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 KHNYNO15037 678 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 DPP6P42658 865 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PTPRNQ16849 979 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 FSCBQ5H9T9 825 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PITRM1Q5JRX3 1037 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 SPDYCQ5MJ68 293 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 OTUD1Q5VV17 481 aaPredicted RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 MMS22LQ6ZRQ5 1243 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 OR2T3Q8NH03 318 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 TBCBQ99426 244 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PRMT1Q99873 361 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 EDEM2Q9BV94 578 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 METTL5Q9NRN9 209 aaKnown RBP16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PIGVQ9NUD9 493 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 VANGL2Q9ULK5 521 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
CPSF6-203ENST00000456847 A0A1B0GVM2 712 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 TCAF2A6NFQ2 919 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 LRRC10BA6NIK2 292 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 SLC30A4O14863 429 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 CHRNB2P17787 502 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 GGCXP38435 758 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 ZNF165P49910 485 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 COPAP53621 1224 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 CENPCQ03188 943 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 FILIP1LQ4L180 1135 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 RNF219Q5W0B1 726 aaPredicted RBP16.75■□□□□ 0.27
CPSF6-203ENST00000456847 IL31Q6EBC2 164 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
CPSF6-203ENST00000456847 LMLNQ96KR4 655 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 C11orf70Q9BRQ4 267 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 SIK2Q9H0K1 926 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 RXFP3Q9NSD7 469 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 HS3ST4Q9Y661 456 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 FRYLO94915 3013 aa16.75■□□□□ 0.27
CPSF6-203ENST00000456847 PATE3B3GLJ2 98 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 PAGE1O75459 146 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 F9P00740 461 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 CYP1A1P04798 512 aaPredicted RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 TFE3P19532 575 aaPredicted RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 CD6P30203 668 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 ZNF33AQ06730 810 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 CAMK2GQ13555 558 aaPredicted RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 AUHQ13825 339 aaKnown RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 SLC25A52Q3SY17 297 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 FBXL22Q6P050 247 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 SYT12Q8IV01 421 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 TTC17Q96AE7 1141 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 HSPA12BQ96MM6 686 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 FBRSQ9HAH7 460 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 USP36Q9P275 1121 aaKnown RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 SUN2Q9UH99 717 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 INTS6Q9UL03 887 aaKnown RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 CEP250Q9BV73 2442 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 DCDC2BA2VCK2 349 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 PDGFRAP16234 1089 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 KCNA4P22459 653 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 ITPKAP23677 461 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 FLT3P36888 993 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 NSFP46459 744 aaKnown RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 KLHL40Q2TBA0 621 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 PHLDB2Q86SQ0 1253 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 METTL3Q86U44 580 aaKnown RBP16.74■□□□□ 0.27
CPSF6-203ENST00000456847 SLC30A5Q8TAD4 765 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
CPSF6-203ENST00000456847 SYCE3A1L190 88 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms