RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 EIF4E1BA6NMX2 242 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ARIH2O95376 493 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PAX3P23760 479 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SDHAF4Q5VUM1 108 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 C16orf89Q6UX73 402 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MTDHQ86UE4 582 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PSTKQ8IV42 348 aaKnown RBP10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 OR52K1Q8NGK4 314 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 UCMAQ8WVF2 138 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ART4Q93070 314 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 APOPT1Q96IL0 206 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TSPAN18Q96SJ8 248 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RUBCNLQ9H714 662 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FGF10O15520 208 aaPredicted RBP10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CLASP2O75122 1294 aaKnown RBP10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TRIM16O95361 564 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 AMHP03971 560 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CHKAP35790 457 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MMP13P45452 471 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SKOR1P84550 965 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PLD1Q13393 1074 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SPANXN3Q5MJ09 141 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SNX31Q8N9S9 440 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RFWD2Q8NHY2 731 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 USP6NLQ92738 828 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SEPT3Q9UH03 358 aa10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 TCRBV7S2A1N4TA0A589 114 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NCF1BA6NI72 391 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NCF1CA8MVU1 366 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NT5C1B-RDH14C9J2C7 533 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SCAMP3O14828 347 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NCF1P14598 390 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 KCNA4P22459 653 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SOX11P35716 441 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 RAP1GAP2Q684P5 730 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 IQCKQ8N0W5 287 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 IL1RL2Q9HB29 575 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 UBA2Q9UBT2 640 aaPredicted RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SLC25A13Q9UJS0 675 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ARHGAP26Q9UNA1 814 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 TRIM13O60858 407 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 FKTNO75072 461 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SERPIND1P05546 499 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NUDT17P0C025 328 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SCTRP47872 440 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NUDT2P50583 147 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 POLE2P56282 527 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 STX5Q13190 355 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 STRADAQ7RTN6 431 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 RPAINQ86UA6 219 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ATXN2LQ8WWM7 1075 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ZNF558Q96NG5 402 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 DEFB118Q96PH6 123 aa10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 MRPL46Q9H2W6 279 aaKnown RBP10.27□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PRR23AA6NEV1 266 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ADCY6O43306 1168 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 LZTS3O60299 673 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 DDHD2O94830 711 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ERVK-10P10266 1014 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ABCG1P45844 678 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 TRIP10Q15642 601 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 KCNA10Q16322 511 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 DDR2Q16832 855 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SLC25A52Q3SY17 297 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PABPC1LQ4VXU2 614 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 GRTP1Q5TC63 336 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NEPROQ6NW34 567 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PMF1Q6P1K2 205 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 XYLT1Q86Y38 959 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 SLC4A11Q8NBS3 891 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NETO2Q8NC67 525 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 LRRC15Q8TF66 581 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PHF21BQ96EK2 531 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NRBF2Q96F24 287 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 FAR2Q96K12 515 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 TMEM120AQ9BXJ8 343 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 EMILIN2Q9BXX0 1053 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 TRIM4Q9C037 500 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 POLR1EQ9GZS1 481 aaKnown RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 IL22Q9GZX6 179 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 UXTQ9UBK9 157 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 ZNF112Q9UJU3 913 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 AJAP1Q9UKB5 411 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 PCDHGC3Q9UN70 934 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 EFR3BQ9Y2G0 817 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 AHDC1Q5TGY3 1603 aaPredicted RBP10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 CHRNB2P17787 502 aa10.26□□□□□ -0.77
CSGALNACT1-203ENST00000454498 NFKB1P19838 968 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms