RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TMTC1Q8IUR5 882 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 MAML2Q8IZL2 1156 aaPredicted RBP28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 CARNMT1Q8N4J0 409 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 ABCB8Q9NUT2 735 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 A0A1B0GVM2 712 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 TCAF2A6NFQ2 919 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 E9PAM4 449 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 RNF8O76064 485 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 TIE1P35590 1138 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 IRAK1P51617 712 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 CCR3P51677 355 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 AIF1P55008 147 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 FSCBQ5H9T9 825 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 TMEM215Q68D42 235 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 LRRC31Q6UY01 552 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 CIR1Q86X95 450 aaPredicted RBP28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 CCAR2Q8N163 923 aaKnown RBP28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 GRPEL1Q9HAV7 217 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 C2orf42Q9NWW7 574 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 UVRAGQ9P2Y5 699 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 OR12D3Q9UGF7 316 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 ANAPC7Q9UJX3 599 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 GGA2Q9UJY4 613 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 INTUQ9ULD6 942 aa28.87■■■□□ 2.21
SMARCC1-203ENST00000454240 LAMTOR5O43504 91 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 CD70P32970 193 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 CXCL12P48061 93 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 CDH18Q13634 790 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 PIGHQ14442 188 aaPredicted RBP28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 HSF5Q4G112 596 aaPredicted RBP28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 CCDC117Q8IWD4 279 aaPredicted RBP28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 IL17RCQ8NAC3 791 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 PRSS33Q8NF86 280 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 WFIKKN2Q8TEU8 576 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 NCAPGQ9BPX3 1015 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 MAGEB5Q9BZ81 275 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 PRMT8Q9NR22 394 aaPredicted RBP28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 FZD10Q9ULW2 581 aa28.86■■■□□ 2.21
SMARCC1-203ENST00000454240 GOLGA6L3A6NEY3 463 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 H0Y626 953 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 TIMM44O43615 452 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 LRCH4O75427 683 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 PAPSS2O95340 614 aaPredicted RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 PABPC1P11940 636 aaKnown RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 CYLC1P35663 651 aaPredicted RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 CDH4P55283 916 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 SATB1Q01826 763 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 LMAN2Q12907 356 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 EIF4HQ15056 248 aaKnown RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 ANGPT1Q15389 498 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 MANEALQ5VSG8 457 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 CHST9Q7L1S5 443 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 SYT13Q7L8C5 426 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 ADIPOR2Q86V24 386 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 ZNF513Q8N8E2 541 aaPredicted RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 NIPA2Q8N8Q9 360 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 ZNF564Q8TBZ8 553 aaPredicted RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 BTBD6Q96KE9 485 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 ELOVL2Q9NXB9 296 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 CTTNBP2NLQ9P2B4 639 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 PPARGC1AQ9UBK2 798 aaKnown RBP28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 IP6K2Q9UHH9 426 aa28.85■■■□□ 2.21
SMARCC1-203ENST00000454240 SOWAHDA6NJG2 315 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 MYO1FO00160 1098 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 SRGAP2O75044 1071 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 CLDN11O75508 207 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 CNTN5O94779 1100 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 HNRNPLP14866 589 aaKnown RBP eCLIP28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 MIPP30301 263 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 TCF15Q12870 199 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 ALFQ53S48 1182 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 EGFLAMQ63HQ2 1017 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 TMEM139Q8IV31 216 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 AHI1Q8N157 1196 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 ALLCQ8N6M5 410 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 ACDQ96AP0 544 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 KIAA1522Q9P206 1035 aaPredicted RBP28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 FBXO4Q9UKT5 387 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 HCN4Q9Y3Q4 1203 aa28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 EPN1Q9Y6I3 576 aaPredicted RBP28.84■■■□□ 2.21
SMARCC1-203ENST00000454240 EIF3CLB5ME19 914 aaKnown RBP28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 FAM72CH0Y354 149 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 PCK1P35558 622 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 MAGEA1P43355 309 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 EFHC2Q5JST6 749 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 FAM72AQ5TYM5 149 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 FAM72DQ6L9T8 149 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 CXorf57Q6NSI4 855 aaKnown RBP28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 FAM72BQ86X60 149 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 PEBP4Q96S96 227 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 EIF3CQ99613 913 aaKnown RBP28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 BAG1Q99933 345 aaPredicted RBP28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 ZDHHC4Q9NPG8 344 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 MPP6Q9NZW5 540 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 INTS6Q9UL03 887 aaKnown RBP28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 MMP17Q9ULZ9 603 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 TBC1D30Q9Y2I9 924 aa28.83■■■□□ 2.21
SMARCC1-203ENST00000454240 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 GOLGA6L6A8MZA4 724 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 KLF8O95600 359 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms