RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SERPINF2P08697 491 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 MSNP26038 577 aaKnown RBP22.43■■□□□ 1.18
C9orf3-208ENST00000451893 SNX16P57768 344 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 PTK2Q05397 1052 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 ZNF252P-AS1Q0IIN9 211 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 SYCP1Q15431 976 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 MEA1Q16626 185 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 MPP7Q5T2T1 576 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 PIK3R6Q5UE93 754 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 OR2T3Q8NH03 318 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 STK32AQ8WU08 396 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 MKRN2Q9H000 416 aaKnown RBP22.43■■□□□ 1.18
C9orf3-208ENST00000451893 FAM204AQ9H8W3 233 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 CD248Q9HCU0 757 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 CAPN11Q9UMQ6 739 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 CNTN6Q9UQ52 1028 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 DAAM1Q9Y4D1 1078 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 CKAP5Q14008 2032 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 SYNJ2BP-COX16A0A087WUM0 186 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 ESPNB1AK53 854 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 CDX4O14627 284 aaPredicted RBP22.42■■□□□ 1.18
C9orf3-208ENST00000451893 OPHN1O60890 802 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 GABBR2O75899 941 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 IGLV3-27P01718 113 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 KRT9P35527 623 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 SGSHP51688 502 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 NNTQ13423 1086 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 METTL3Q86U44 580 aaKnown RBP22.42■■□□□ 1.18
C9orf3-208ENST00000451893 TAC4Q86UU9 113 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 FAM124AQ86V42 546 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 CHSY1Q86X52 802 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 PASD1Q8IV76 773 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 SLC41A1Q8IVJ1 513 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 ZNF366Q8N895 744 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 ZNF397Q8NF99 534 aaPredicted RBP22.42■■□□□ 1.18
C9orf3-208ENST00000451893 SNX19Q92543 992 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 AZIN2Q96A70 460 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 NAA15Q9BXJ9 866 aaKnown RBP22.42■■□□□ 1.18
C9orf3-208ENST00000451893 LHX5Q9H2C1 402 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 FSCN3Q9NQT6 498 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 ITM2CQ9NQX7 267 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 COX16Q9P0S2 106 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 SIK3Q9Y2K2 1263 aa22.42■■□□□ 1.18
C9orf3-208ENST00000451893 H0Y626 953 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 DNTTP04053 509 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 DLDP09622 509 aaKnown RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 SLC6A4P31645 630 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 TPMTP51580 245 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 PDCLQ13371 301 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 ENPP2Q13822 863 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 TSR1Q2NL82 804 aaKnown RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 PEAR1Q5VY43 1037 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 RNF219Q5W0B1 726 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 TMEM215Q68D42 235 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 ATP6V0D2Q8N8Y2 350 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 TC2NQ8N9U0 490 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 ZNF419Q96HQ0 510 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 FCRL2Q96LA5 508 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 PCMTD1Q96MG8 357 aaPredicted RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 KCNF1Q9H3M0 494 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 FBRSQ9HAH7 460 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 ACP6Q9NPH0 428 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 USP36Q9P275 1121 aaKnown RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 SUN2Q9UH99 717 aa22.41■■□□□ 1.18
C9orf3-208ENST00000451893 LUC7L2Q9Y383 392 aaKnown RBP22.41■■□□□ 1.18
C9orf3-208ENST00000451893 MFAP3LO75121 409 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 GYPCP04921 128 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 CD70P32970 193 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 YWHAZP63104 245 aaKnown RBP22.4■■□□□ 1.18
C9orf3-208ENST00000451893 CDK17Q00537 523 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 TTC31Q49AM3 519 aaPredicted RBP22.4■■□□□ 1.18
C9orf3-208ENST00000451893 DCAF6Q58WW2 860 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 FAM133BQ5BKY9 247 aaKnown RBP22.4■■□□□ 1.18
C9orf3-208ENST00000451893 LGI2Q8N0V4 545 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 DEFB124Q8NES8 71 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 GANCQ8TET4 914 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 SLC4A5Q9BY07 1137 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 NUCKS1Q9H1E3 243 aaKnown RBP22.4■■□□□ 1.18
C9orf3-208ENST00000451893 PLCB1Q9NQ66 1216 aa22.4■■□□□ 1.18
C9orf3-208ENST00000451893 WSB2Q9NYS7 404 aaPredicted RBP22.4■■□□□ 1.18
C9orf3-208ENST00000451893 F5H5T6 163 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ARHGAP33O14559 1287 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 PAPSS1O43252 624 aaPredicted RBP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 RNASEH1O60930 286 aaKnown RBP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 TRUB2O95900 331 aaKnown RBP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 SKILP12757 684 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 CEACAM1P13688 526 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 CSRP1P21291 193 aaKnown RBP22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ABCB4P21439 1286 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 PON1P27169 355 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 MAOBP27338 520 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 CASP14P31944 242 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ZBED6P86452 979 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 FOXC1Q12948 553 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 RAPGEF1Q13905 1077 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ARID5BQ14865 1188 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 DCAF12L1Q5VU92 463 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 SYPL2Q5VXT5 272 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 OR6B2Q6IFH4 312 aa22.39■■□□□ 1.17
C9orf3-208ENST00000451893 ADIPOR2Q86V24 386 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms