RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 A0A0G2JND7 137 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 EEF2KO00418 725 aaKnown RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 PRKCHP24723 683 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 PSMB4P28070 264 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 ETV4P43268 484 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 CUL3Q13618 768 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF449Q6P9G9 518 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 FAM35AQ86V20 835 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 NT5C3BQ969T7 300 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 ALKBH8Q96BT7 664 aaKnown RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 SPATA13Q96N96 652 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 PNPLA8Q9NP80 782 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 RABL2AQ9UBK7 228 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 GTF2IRD1Q9UHL9 959 aa12.42□□□□□ -0.42
COL27A1-202ENST00000451716 MAGED2Q9UNF1 606 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-202ENST00000451716 HMX2A2RU54 273 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 COPEO14579 308 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 MGRN1O60291 552 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 F7P08709 466 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 SNRPAP09012 282 aaKnown RBP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 SLC18A2Q05940 514 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 SEMA5AQ13591 1074 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 TIGD5Q53EQ6 642 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ZIC5Q96T25 663 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 CENPOQ9BU64 300 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 CORO1CQ9ULV4 474 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 STAP1Q9ULZ2 295 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 TRPV2Q9Y5S1 764 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 F8W810 466 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 H3BRJ5 948 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 USP12O75317 370 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 KRT37O76014 449 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 CBX6O95503 412 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 MGAT1P26572 445 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ABL2P42684 1182 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 BRCC3P46736 316 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 TRPC1P48995 793 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 IRX4P78413 519 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 RFX8Q6ZV50 586 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 GSDMBQ8TAX9 411 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 SLC2A13Q96QE2 648 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 FRMD8Q9BZ67 464 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 DNAI2Q9GZS0 605 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 VPS11Q9H270 941 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-202ENST00000451716 PCMTD2Q9NV79 361 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 GABRQQ9UN88 632 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 INPP5FQ9Y2H2 1132 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 Q9Y3F1 56 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
COL27A1-202ENST00000451716 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 MANSC4A6NHS7 340 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 MGEA5O60502 916 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 DUSP11O75319 330 aaKnown RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 RFPL1O75677 317 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 ATP6V1G2O95670 118 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 TPSB2P20231 275 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 CD52P31358 61 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 ADRA1BP35368 520 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 DAOAP59103 153 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 WASHC5Q12768 1159 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 NLRP9Q7RTR0 991 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 MTDHQ86UE4 582 aaKnown RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 ZNF567Q8N184 647 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 KCTD13Q8WZ19 329 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 SLC35B4Q969S0 331 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 OXNAD1Q96HP4 312 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 SMIM24O75264 130 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 B3GAT3O94766 335 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 UNC5CO95185 931 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 DHRS4L1P0CG22 281 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 ERCC2P18074 760 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 SLC8A1P32418 973 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 THPOP40225 353 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 SERPINB4P48594 390 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 PID1Q7Z2X4 250 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 TRIB2Q92519 343 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 PGBD4Q96DM1 585 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 STAMBPL1Q96FJ0 436 aa12.4□□□□□ -0.42
COL27A1-202ENST00000451716 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
COL27A1-202ENST00000451716 CFAP73A6NFT4 308 aa12.4□□□□□ -0.43
COL27A1-202ENST00000451716 ALADP13716 330 aa12.4□□□□□ -0.43
COL27A1-202ENST00000451716 BDNFP23560 247 aa12.4□□□□□ -0.43
COL27A1-202ENST00000451716 GMPRP36959 345 aa12.4□□□□□ -0.43
COL27A1-202ENST00000451716 INHBCP55103 352 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms