RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ZNF317Q96PQ6 595 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PIGSQ96S52 555 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCTD15Q96SI1 283 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZSCAN5AQ9BUG6 496 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 AGXT2Q9BYV1 514 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZCWPW1Q9H0M4 648 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EHD4Q9H223 541 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EBF3Q9H4W6 596 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ELOVL6Q9H5J4 265 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CXorf21Q9HAI6 301 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SERHLQ9NQF3 203 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 POLR3BQ9NW08 1133 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC9A2Q9UBY0 812 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 HMGXB4Q9UGU5 601 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 XPO7Q9UIA9 1087 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PSME2Q9UL46 239 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NAALADL1Q9UQQ1 740 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GDAQ9Y2T3 454 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NDUFAF1Q9Y375 327 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RTCBQ9Y3I0 505 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF330Q9Y3S2 320 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 V9GY48 417 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 COL22A1Q8NFW1 1626 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 OR6C65A6NJZ3 312 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KIF28PB7ZC32 967 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 IFRD1O00458 451 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 BTN3A1O00481 513 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 AIM2O14862 343 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 BACH1O14867 736 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZW10O43264 779 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ALX3O95076 343 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CRTAMO95727 393 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EGFRP00533 1210 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 HLA-DRAP01903 254 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CYP2D6P10635 497 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CDH1P12830 882 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 BMP1P13497 986 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MUTP22033 750 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GSTM2P28161 218 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SDC2P34741 201 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SPRP35270 261 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ACADSBP45954 432 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CYP2J2P51589 502 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NFIAQ12857 509 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC39A6Q13433 755 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SSX2Q16385 188 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TAF12Q16514 161 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ITPRIPL1Q6GPH6 555 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PYHIN1Q6K0P9 492 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CRTC3Q6UUV7 619 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 FAM92BQ6ZTR7 304 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TMEM26Q6ZUK4 368 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RFX8Q6ZV50 586 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ASRGL1Q7L266 308 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SYTL1Q8IYJ3 562 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF34Q8IZ26 560 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ADGRF2Q8IZF7 708 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 LSMEM2Q8N112 164 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PARP8Q8N3A8 854 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SPATA6LQ8N4H0 392 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MYCT1Q8N699 235 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CCDC185Q8N715 623 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C12orf50Q8NA57 414 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 TRPV1Q8NER1 839 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 AKAP1Q92667 903 aaKnown RBP eCLIP2.25□□□□□ -2.05
USP53-202ENST00000450251 GATA6Q92908 595 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 FAM162AQ96A26 154 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ISOC1Q96CN7 298 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZC3H10Q96K80 434 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PRICKLE1Q96MT3 831 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 WRNIP1Q96S55 665 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PELOQ9BRX2 385 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 FICDQ9BVA6 458 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TLR10Q9BXR5 811 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 XKR8Q9H6D3 395 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TLE6Q9H808 572 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PCDH9Q9HC56 1237 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ENTPD7Q9NQZ7 604 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ABCB10Q9NRK6 738 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SNTG2Q9NY99 539 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GTSE1Q9NYZ3 720 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NINJ2Q9NZG7 142 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCND2Q9NZV8 630 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 HESX1Q9UBX0 185 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCNN3Q9UGI6 736 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SEPT9Q9UHD8 586 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 CDH22Q9UJ99 828 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C3orf18Q9UK00 162 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SPATA2Q9UM82 520 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EDARQ9UNE0 448 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MAB21L2Q9Y586 359 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PCDHB2Q9Y5E7 798 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C10orf71Q711Q0 1435 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 UBE2QL1A1L167 161 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 A8MUI8 341 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 BOLA2-SMG1P6H3BVE0 249 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PDE2AO00408 941 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 KLF11O14901 512 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ONECUT3O60422 494 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZPR1O75312 459 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms