RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 GP5P40197 560 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 GRIA4P48058 902 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 IDH3AP50213 366 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 KLF1Q13351 362 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SLC9B1Q4ZJI4 515 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SKA2Q8WVK7 121 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 HTR3CQ8WXA8 447 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 LRTOMTQ8WZ04 291 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TUBGCP3Q96CW5 907 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 GID8Q9NWU2 228 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 DAPK2Q9UIK4 370 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 KCPQ6ZWJ8 1503 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TK2O00142 265 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SPTLC1O15269 473 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 MAN1A2O60476 641 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 METTL18O95568 372 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TRUB2O95900 331 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TCF7P36402 384 aaPredicted RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 BAG6P46379 1132 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 YAP1P46937 504 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 STT3AP46977 705 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 GSSP48637 474 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 TMEM132DQ14C87 1099 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 RIN3Q8TB24 985 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 KCTD4Q8WVF5 259 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 SLC39A3Q9BRY0 314 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 CSADQ9Y600 493 aa12.68□□□□□ -0.38
UBE3B-204ENST00000449510 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
UBE3B-204ENST00000449510 MYO5AQ9Y4I1 1855 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 M0R3G1 203 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 EEF2KO00418 725 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ZBTB17Q13105 803 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 CTBP1Q13363 440 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 DGCR6Q14129 220 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 KYAT3Q6YP21 454 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 MIER2Q8N344 545 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SLCO2A1Q92959 643 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 VPS33BQ9H267 617 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SNX15Q9NRS6 342 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 DSEQ9UL01 958 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 BAG5Q9UL15 447 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 TELO2Q9Y4R8 837 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ASLP04424 464 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 TXNP10599 105 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 GOT1P17174 413 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 RPL10P27635 214 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 GCAP28676 217 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PTPN7P35236 360 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 CDH13P55290 713 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 WNT7BP56706 349 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 STX5Q13190 355 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 FASTKQ14296 549 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PACS1Q6VY07 963 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ZC3H3Q8IXZ2 948 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 GATA6Q92908 595 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 VANGL2Q9ULK5 521 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 DGKBQ9Y6T7 804 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 TUBGCP6Q96RT7 1819 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 HEATR9A2RTY3 570 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 RGSL1A5PLK6 1076 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 KCNU1A8MYU2 1149 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PDLIM1O00151 329 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 UBDO15205 165 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 TGDSO95455 350 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ALBP02768 609 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ZNF460Q14592 562 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 TLR1Q15399 786 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 PLD5Q8N7P1 536 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 ITFG2Q969R8 447 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 OXCT2Q9BYC2 517 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-204ENST00000449510 NDEL1Q9GZM8 345 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 COQ10BQ9H8M1 238 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 RIPK3Q9Y572 518 aa12.67□□□□□ -0.38
UBE3B-204ENST00000449510 C3orf70A6NLC5 250 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 MRASO14807 208 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 BUD23O43709 281 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ENTPD3O75355 529 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 VNN1O95497 513 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 LSM8O95777 96 aaKnown RBP12.66□□□□□ -0.38
UBE3B-204ENST00000449510 VTNP04004 478 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 CCDC130P13994 396 aa12.66□□□□□ -0.38
UBE3B-204ENST00000449510 ENTPD1P49961 510 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms