RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 PDCLQ13371 301 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 HNRNPDQ14103 355 aaKnown RBP14.19□□□□□ -0.14
TOM1-211ENST00000449508 TAF5Q15542 800 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 RAP1GAP2Q684P5 730 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 MMS22LQ6ZRQ5 1243 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 CHSY1Q86X52 802 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 WDTC1Q8N5D0 677 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 ATP6V0D2Q8N8Y2 350 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 PPP1R13BQ96KQ4 1090 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 BTN2A3PQ96KV6 586 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 BTBD1Q9H0C5 482 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 PCED1AQ9H1Q7 454 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 C6orf106Q9H6K1 298 aaPredicted RBP14.19□□□□□ -0.14
TOM1-211ENST00000449508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.19□□□□□ -0.14
TOM1-211ENST00000449508 CHMP5Q9NZZ3 219 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
TOM1-211ENST00000449508 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 CEP83Q9Y592 693 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 PCDHB9Q9Y5E1 797 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 AKAP13Q12802 2813 aa14.19□□□□□ -0.14
TOM1-211ENST00000449508 SYNJ2BP-COX16A0A087WUM0 186 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 KCNU1A8MYU2 1149 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 C1QTNF9BB2RNN3 333 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 SH3BP5O60239 455 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 RNASEH1O60930 286 aaKnown RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 PROS1P07225 676 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 C1QTNF9P0C862 333 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 C7P10643 843 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 KRT9P35527 623 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 FAM193AP78312 1265 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 PITX1P78337 314 aaPredicted RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 CDK17Q00537 523 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 PTK2Q05397 1052 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 HNRNPA1L2Q32P51 320 aaKnown RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 PITRM1Q5JRX3 1037 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 EFHC1Q5JVL4 640 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 ZNF776Q68DI1 518 aaPredicted RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 UNQ6494/PRO21346Q6UXR6 183 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 PASD1Q8IV76 773 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
TOM1-211ENST00000449508 DEFB106AQ8N104 65 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 GANCQ8TET4 914 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 SHC3Q92529 594 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 RNF34Q969K3 372 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 MYO19Q96H55 970 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 CAMK1GQ96NX5 476 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 CPXM1Q96SM3 734 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 COX16Q9P0S2 106 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 ERVW-1Q9UQF0 538 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 NCKAP1Q9Y2A7 1128 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 FRYQ5TBA9 3013 aa14.18□□□□□ -0.14
TOM1-211ENST00000449508 F5H5T6 163 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 FOXN3O00409 490 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 HYAL3O43820 417 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 SIN3BO75182 1162 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 GRAP2O75791 330 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 SEMA4FO95754 770 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 IGLV3-25P01717 112 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 GLI1P08151 1106 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 SRPRAP08240 638 aaKnown RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 SLC2A3P11169 496 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 ABCB4P21439 1286 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 CTSOP43234 321 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 CSNK1EP49674 416 aaKnown RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 ECT2LQ008S8 904 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 SFSWAPQ12872 951 aaKnown RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 TRIP6Q15654 476 aaKnown RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 RNF219Q5W0B1 726 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 IL27RAQ6UWB1 636 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 APCDD1Q8J025 514 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 C1orf216Q8TAB5 229 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 MRGPRX3Q96LB0 322 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 NOX5Q96PH1 765 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 GAREM1Q9H706 876 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 FAM204AQ9H8W3 233 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 SGK2Q9HBY8 427 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 DNAJC12Q9UKB3 198 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 SCML1Q9UN30 329 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
TOM1-211ENST00000449508 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.17□□□□□ -0.14
TOM1-211ENST00000449508 IGF2RP11717 2491 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 A0A1B0GVT2 93 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 TARSL2A2RTX5 802 aaKnown RBP14.16□□□□□ -0.14
TOM1-211ENST00000449508 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 FSBPO95073 299 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 TRIM16O95361 564 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 CER1O95813 267 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 CCR1P32246 355 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 CLCN1P35523 988 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 MATKP42679 507 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 AFF3P51826 1226 aaKnown RBP14.16□□□□□ -0.14
TOM1-211ENST00000449508 SNX16P57768 344 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 BNC1Q01954 994 aa14.16□□□□□ -0.14
TOM1-211ENST00000449508 EIF4EBP2Q13542 120 aaPredicted RBP14.16□□□□□ -0.14
TOM1-211ENST00000449508 MAN2A1Q16706 1144 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms