RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SETDB1Q15047 1291 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 SAPCD2Q86UD0 394 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 ARID3BQ8IVW6 561 aaPredicted RBP15.21■□□□□ 0.03
SF1-211ENST00000448404 ADAM2Q99965 735 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 SENP6Q9GZR1 1112 aaPredicted RBP15.21■□□□□ 0.03
SF1-211ENST00000448404 ZFP69BQ9UJL9 534 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 SCN4AP35499 1836 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 TPP1O14773 563 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 ALDOAP04075 364 aaKnown RBP15.21■□□□□ 0.03
SF1-211ENST00000448404 PRKCHP24723 683 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 FKBP1BP68106 108 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 DPYSQ14117 519 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 RFWD3Q6PCD5 774 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 TAC4Q86UU9 113 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 ATXN3LQ9H3M9 355 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 ARHGEF3Q9NR81 526 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 HCSTQ9UBK5 93 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 TRPV2Q9Y5S1 764 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 RPS6KL1Q9Y6S9 549 aa15.21■□□□□ 0.03
SF1-211ENST00000448404 HHLA1C9JL84 531 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 DCLK1O15075 740 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 ITM2AO43736 263 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 SOAT2O75908 522 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 KRT37O76014 449 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 LRIG2O94898 1065 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 LTFP02788 710 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 DHRS4L1P0CG22 281 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 PTPN3P26045 913 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 CD68P34810 354 aaPredicted RBP15.2■□□□□ 0.02
SF1-211ENST00000448404 CLNKQ7Z7G1 428 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 TNS4Q8IZW8 715 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 AGR3Q8TD06 166 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 NT5C3BQ969T7 300 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 NKX1-2Q9UD57 310 aaPredicted RBP15.2■□□□□ 0.02
SF1-211ENST00000448404 OR12D3Q9UGF7 316 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 PLLPQ9Y342 182 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 FAM159BA6NKW6 160 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 H3BRJ5 948 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 JCHAINP01591 159 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 SNX16P57768 344 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 CDC42EP1Q00587 391 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 ZBTB16Q05516 673 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 CRYMQ14894 314 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 PRKD1Q15139 912 aaPredicted RBP15.2■□□□□ 0.02
SF1-211ENST00000448404 KCNA10Q16322 511 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 UPP1Q16831 310 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 DNAAF3Q8N9W5 541 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 SHKBP1Q8TBC3 707 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 MIPEPQ99797 713 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 EBF4Q9BQW3 602 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 STAP1Q9ULZ2 295 aa15.2■□□□□ 0.02
SF1-211ENST00000448404 TTC24A2A3L6 582 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 TM9SF1O15321 606 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 MT-CYBP00156 380 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 RASA2Q15283 850 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 CD300LGQ6UXG3 332 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 RGS9BPQ6ZS82 235 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 ZNF280BQ86YH2 543 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 TTC8Q8TAM2 541 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 SLC2A13Q96QE2 648 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 TBC1D10AQ9BXI6 508 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 OXCT2Q9BYC2 517 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 SHCBP1LQ9BZQ2 653 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 RALGAPA2Q2PPJ7 1873 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 DFFAO00273 331 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 DLDP09622 509 aaKnown RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 NFKB1P19838 968 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 NR2C2P49116 596 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 NOMO2Q5JPE7 1267 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 LONP2Q86WA8 852 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 NMUR2Q9GZQ4 415 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 VPS11Q9H270 941 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 WDCPQ9H6R7 721 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 XPNPEP3Q9NQH7 507 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 PRG3Q9Y2Y8 225 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 DUSP11O75319 330 aaKnown RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 ENTPD5O75356 428 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 GNAT1P11488 350 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 HOXC8P31273 242 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 ARRB2P32121 409 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 ARFIP2P53365 341 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 TTC9BQ8N6N2 239 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 MCUQ8NE86 351 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 GRAMD1AQ96CP6 724 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 MLPHQ9BV36 600 aaPredicted RBP15.19■□□□□ 0.02
SF1-211ENST00000448404 MOCS1Q9NZB8 636 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 MPP6Q9NZW5 540 aa15.19■□□□□ 0.02
SF1-211ENST00000448404 SDR42E2A6NKP2 422 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 DNAJC6O75061 913 aa15.18■□□□□ 0.02
SF1-211ENST00000448404 ALADP13716 330 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms