RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 STRADAQ7RTN6 431 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 ANKS1BQ7Z6G8 1248 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 CCDC117Q8IWD4 279 aaPredicted RBP13.8□□□□□ -0.2
SNHG4-201ENST00000448190 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 CCAR2Q8N163 923 aaKnown RBP13.8□□□□□ -0.2
SNHG4-201ENST00000448190 PYROXD2Q8N2H3 581 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 ARFGAP1Q8N6T3 406 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 FIBINQ8TAL6 211 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 GPATCH2LQ9NWQ4 482 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 PCSK1NQ9UHG2 260 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 GGA2Q9UJY4 613 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 PAXBP1Q9Y5B6 917 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 RAD54BQ9Y620 910 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 COL4A2P08572 1712 aa13.8□□□□□ -0.2
SNHG4-201ENST00000448190 VPS13AQ96RL7 3174 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 E9PAM4 449 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 CYP1A2P05177 515 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 MYBL1P10243 752 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 PABPC1P11940 636 aaKnown RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 CDH18Q13634 790 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ALFQ53S48 1182 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 MBLAC2Q68D91 279 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 LRRC31Q6UY01 552 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 SYT13Q7L8C5 426 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 TFAP2DQ7Z6R9 452 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ADIPOR2Q86V24 386 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 ZNF683Q8IZ20 524 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 APCDD1Q8J025 514 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 CCDC26Q8TAB7 109 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 TRIM11Q96F44 468 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 LMLNQ96KR4 655 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 HAPLN3Q96S86 360 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 NUP85Q9BW27 656 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 PRMT8Q9NR22 394 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 OR12D3Q9UGF7 316 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 INTS6Q9UL03 887 aaKnown RBP13.79□□□□□ -0.2
SNHG4-201ENST00000448190 MMP17Q9ULZ9 603 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 NENFQ9UMX5 172 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 INVSQ9Y283 1065 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 STARD13Q9Y3M8 1113 aa13.79□□□□□ -0.2
SNHG4-201ENST00000448190 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 TDGF1P13385 188 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 POLR2EP19388 210 aaKnown RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 NTSR1P30989 418 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 CSKP41240 450 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 CTSOP43234 321 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 SRSF5Q13243 272 aaKnown RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 CRY1Q16526 586 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 ARL13BQ3SXY8 428 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 FUT11Q495W5 492 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 ARTNQ5T4W7 220 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 KIAA0907Q7Z7F0 614 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 ZNF366Q8N895 744 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 OR52K2Q8NGK3 314 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 IRX2Q9BZI1 471 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 KCNH6Q9H252 994 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-201ENST00000448190 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 STON1Q9Y6Q2 735 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 SCINQ9Y6U3 715 aa13.78□□□□□ -0.2
SNHG4-201ENST00000448190 TIMM44O43615 452 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 H2AFZP0C0S5 128 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 HLA-EP13747 358 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 TCF4P15884 667 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 MIPP30301 263 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 NHLH1Q02575 133 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 ZNF234Q14588 700 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 FNDC3BQ53EP0 1204 aaKnown RBP13.77□□□□□ -0.21
SNHG4-201ENST00000448190 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 EOGTQ5NDL2 527 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 RNF219Q5W0B1 726 aaPredicted RBP13.77□□□□□ -0.21
SNHG4-201ENST00000448190 RNF43Q68DV7 783 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 KIAA1211LQ6NV74 962 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 WDR87Q6ZQQ6 2873 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 H2AFVQ71UI9 128 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 TSTD1Q8NFU3 115 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 UCMAQ8WVF2 138 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 ATRIPQ8WXE1 791 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 ACDQ96AP0 544 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 IER2Q9BTL4 223 aa13.77□□□□□ -0.21
SNHG4-201ENST00000448190 OSBPL2Q9H1P3 480 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms