RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 TDRD5Q8NAT2 981 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 TMEM116Q8NCL8 245 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 MOSPD2Q8NHP6 518 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 OVCA2Q8WZ82 227 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SECISBP2LQ93073 1101 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 SLC22A18Q96BI1 424 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 ZBTB8AQ96BR9 441 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 INTS12Q96CB8 462 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 RNFT2Q96EX2 444 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SIPA1Q96FS4 1042 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 KLHL15Q96M94 604 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 GCNAQ96QF7 691 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 GPHA2Q96T91 129 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 THUMPD3Q9BV44 507 aaKnown RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 DNAI2Q9GZS0 605 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CTDSP1Q9GZU7 261 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SMOC2Q9H3U7 446 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 TTC12Q9H892 705 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 L2HGDHQ9H9P8 463 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 COPS7BQ9H9Q2 264 aaPredicted RBP4.08□□□□□ -1.76
PMS1-216ENST00000447734 PDRG1Q9NUG6 133 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SELENONQ9NZV5 590 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CD207Q9UJ71 328 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 SLC12A4Q9UP95 1085 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 CTNND2Q9UQB3 1225 aa4.08□□□□□ -1.76
PMS1-216ENST00000447734 hCG_1809904A0A1W2PP81 198 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 A0A1W2PPE2 198 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 A0A1W2PR64 198 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 GLOD5A6NK44 160 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PRR5-ARHGAP8B1AHC4 643 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 INO80B-WBP1J3KQ70 363 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 HRKO00198 91 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 GRM8O00222 908 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CTDSP2O14595 271 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CPLX1O14810 134 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 IPO8O15397 1037 aaKnown RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 B3GALNT1O75752 331 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PRSS23O95084 383 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 OR2C1O95371 312 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CSF1RP07333 972 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CCDC175P0C221 793 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ZNF888P0CJ79 500 aaPredicted RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 TMEM225BP0DP42 221 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PEPDP12955 493 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ADORA2AP29274 412 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PPIFP30405 207 aaKnown RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 CSF2RBP32927 897 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 GP5P40197 560 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 SLC15A1P46059 708 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ALDH3A2P51648 485 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 NCKAP1LP55160 1127 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 EFNB1P98172 346 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 SEMA3BQ13214 749 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CAMK2DQ13557 499 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CBFBQ13951 182 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 KRTCAP3Q53RY4 240 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ZNF805Q5CZA5 627 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 KRBOX4Q5JUW0 171 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 UBAP2Q5T6F2 1119 aaKnown RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 EFCAB12Q6NXP0 572 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 TATDN1Q6P1N9 297 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ALKBH5Q6P6C2 394 aaKnown RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 IYDQ6PHW0 289 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CPLX2Q6PUV4 134 aaKnown RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 Q6ZUG5 572 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CHST3Q7LGC8 479 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PLPPR4Q7Z2D5 763 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 GPRIN1Q7Z2K8 1008 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ADGRE4PQ86SQ3 457 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 SYT2Q8N9I0 419 aaPredicted RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 POC1BQ8TC44 478 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 FAM149B1Q96BN6 582 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 SAT2Q96F10 170 aaPredicted RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 PKNOX2Q96KN3 472 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 RAB3IPQ96QF0 476 aaPredicted RBP4.07□□□□□ -1.76
PMS1-216ENST00000447734 HAPLN3Q96S86 360 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 VN1R3Q9BXE9 311 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 ABCG4Q9H172 646 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 SLC32A1Q9H598 525 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CXorf56Q9H5V9 222 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 OPA3Q9H6K4 179 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 LTB4R2Q9NPC1 389 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 KCNK9Q9NPC2 374 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 PFDN4Q9NQP4 134 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.07□□□□□ -1.76
PMS1-216ENST00000447734 THAP1Q9NVV9 213 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 COQ3Q9NZJ6 369 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 EPS15L1Q9UBC2 864 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 STEAP1Q9UHE8 339 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 CDH22Q9UJ99 828 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 TRPV2Q9Y5S1 764 aa4.07□□□□□ -1.76
PMS1-216ENST00000447734 NCANO14594 1321 aa4.06□□□□□ -1.76
PMS1-216ENST00000447734 A0A1W2PQM1 296 aa4.06□□□□□ -1.76
PMS1-216ENST00000447734 UBE2QL1A1L167 161 aa4.06□□□□□ -1.76
PMS1-216ENST00000447734 BTBD18B2RXH4 712 aa4.06□□□□□ -1.76
PMS1-216ENST00000447734 PER2O15055 1255 aa4.06□□□□□ -1.76
PMS1-216ENST00000447734 NKX2-8O15522 239 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms