RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 ARCQ7LC44 396 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 KIAA0907Q7Z7F0 614 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 AHI1Q8N157 1196 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 C3orf20Q8ND61 904 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 WFIKKN2Q8TEU8 576 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 UCMAQ8WVF2 138 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 GAB3Q8WWW8 586 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 RPRD1AQ96P16 312 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 GABRG3Q99928 467 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 IRX2Q9BZI1 471 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 SLC6A17Q9H1V8 727 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 CD248Q9HCU0 757 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 POLMQ9NP87 494 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 THAP10Q9P2Z0 257 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 EBF1Q9UH73 591 aa15.33■□□□□ 0.04
HDAC4-204ENST00000446876 INTS6Q9UL03 887 aaKnown RBP15.33■□□□□ 0.04
HDAC4-204ENST00000446876 PIEZO1Q92508 2521 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 CCDC163A0A0D9SF12 145 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 H0Y626 953 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 F9P00740 461 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 PLEKP08567 350 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-204ENST00000446876 HLA-EP13747 358 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 GABRG2P18507 467 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 CASP14P31944 242 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 EIF4HQ15056 248 aaKnown RBP15.32■□□□□ 0.04
HDAC4-204ENST00000446876 TDRD12Q587J7 1177 aaKnown RBP15.32■□□□□ 0.04
HDAC4-204ENST00000446876 RABGAP1LQ5R372 815 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 HGSNATQ68CP4 663 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 SDE2Q6IQ49 451 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 WDR59Q6PJI9 974 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 CCAR2Q8N163 923 aaKnown RBP15.32■□□□□ 0.04
HDAC4-204ENST00000446876 PGBD3Q8N328 593 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 DCLK2Q8N568 766 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF366Q8N895 744 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 FIBINQ8TAL6 211 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 RLN3Q8WXF3 142 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 MCEEQ96PE7 176 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 CAPN11Q9UMQ6 739 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 DOCK4Q8N1I0 1966 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 ITIH6Q6UXX5 1313 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 OTOGLQ3ZCN5 2332 aa15.32■□□□□ 0.04
HDAC4-204ENST00000446876 NYNRINQ9P2P1 1898 aaKnown RBP15.31■□□□□ 0.04
HDAC4-204ENST00000446876 PLXND1Q9Y4D7 1925 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 ABCA7Q8IZY2 2146 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 SDK1Q7Z5N4 2213 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 SIGLEC16A6NMB1 481 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 ALDH1A2O94788 518 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 TPM3P06753 285 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 GPD1P21695 349 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 BCKDHBP21953 392 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 CNR2P34972 360 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 CSKP41240 450 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 PTPN9P43378 593 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 RPL7AP62424 266 aaKnown RBP15.31■□□□□ 0.04
HDAC4-204ENST00000446876 ZBED6P86452 979 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 PTPRNQ16849 979 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 FNDC3BQ53EP0 1204 aaKnown RBP15.31■□□□□ 0.04
HDAC4-204ENST00000446876 PITRM1Q5JRX3 1037 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 PPP1R15BQ5SWA1 713 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 KBTBD6Q86V97 674 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF683Q8IZ20 524 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 APCDD1Q8J025 514 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 FRMD1Q8N878 549 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
HDAC4-204ENST00000446876 A0A1B0GVM2 712 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 FAM186AA6NE01 2351 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 TCAF2A6NFQ2 919 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 AP5Z1O43299 807 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CCP110O43303 1012 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CBFA2T2O43439 604 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CNTN5O94779 1100 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 ENDOD1O94919 500 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 POLR2EP19388 210 aaKnown RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 NDUFV2P19404 249 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CTSOP43234 321 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 HDAC4P56524 1084 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 OGDHQ02218 1023 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 ENPP2Q13822 863 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 ALFQ53S48 1182 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 RALGAPA1Q6GYQ0 2036 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CXorf57Q6NSI4 855 aaKnown RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 SERPINA13PQ6UXR4 307 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CACUL1Q86Y37 369 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CCDC117Q8IWD4 279 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 FAM160A2Q8N612 972 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CCDC185Q8N715 623 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.046e-9■■□□□ 13.8
HDAC4-204ENST00000446876 MAGEB5Q9BZ81 275 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CD93Q9NPY3 652 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 NCDNQ9UBB6 729 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 RAB23Q9ULC3 237 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 LUC7L2Q9Y383 392 aaKnown RBP15.3■□□□□ 0.04
HDAC4-204ENST00000446876 PAXBP1Q9Y5B6 917 aa15.3■□□□□ 0.04
HDAC4-204ENST00000446876 CEP192Q8TEP8 1941 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms